| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_44601 |
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| Symbol | Lhcr1 |
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| ID | 7198100 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011672 |
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| Strand | - |
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| Start bp | 1013568 |
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| End bp | 1014568 |
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| Gene Length | 1001 bp |
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| Protein Length | 200 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | protein fucoxanthin chlorophyll a/c protein |
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| Protein accession | XP_002178624 |
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| Protein GI | 219115657 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCACCGAA TAGATACACC AACCAAGGAG GCTAGTGCAA GCTGTCCAGC ATCTTTTTCA
GAGTGCTATC GTTTTTGACC ATGAAGTACG CCGTCTTTGC CTCTCTTTTG GCCAGCGCTG
CTGCCTTTGC CCCGGCTGCG AAGGTGTGTT GGACCTACGG GTTTCCCATG TAGTTCGTTC
AGTAACAGAG GCAGGAATCG TCTTTTTGTA GACCGCAATT TTGTAGACCG CAATCATCGC
GCAAGAACCC CGAACGCCCT ACTTCTTGTT TTAAAAACAA TACTCCTCCT TTCATGTAGA
AATTCAACTC TCCGTGGCTA ACACATTTTT GGTTTGTTTC GTATTTCTCT TAGCCTGCGG
CTTCGACTTC CGCGTTGAAT GCGGAAATGT CCAAATCCAT GCCTTTCCTA ACGGCTCCCA
AGAACACTGG GGGCTACGTC GGGGATGTTG GCTTTGATCC GCTTGGATTC TCCGACAACT
TCGACATGAA GTGGCTGCGC GAGAGCGAAA TCAAACACGG ACGGGCCGCT ATGTTGGCCA
CTGTCGGATT TGTCATGCAA CAGTTCTGGA CTCTTCCCGG TATGGTTCAT GTGGATGACT
CGAACCTGGC GCCAGGAGCA GCTGGTATCT CGCCCATGCT GCAAATTGTC TTCGGAATGG
GCGCCCTGGA ATGGTGGACT AATAAGGGAA AAGTCACGAT GGAAGATATG TTCAGTGACA
GCAGCCGCGA ACCTGGTAAT CTTGGATTCG ACCCCATGGG CATGTCCAAG AACAAGTCCA
AGGAAGAAGC CGAAGCCATG CAACTCAAGG AAATCAAAAA TGGACGATTG GCCATGTTGG
CTATTGGAGG TATGATCCAT CACAACTGGG TGACCGGTGA AGCCCTGTTC TGATGCGTCT
GCGAGCAGCG GGACGCTGGC AAAGAACCCA TGAACGGATG CAGCGACTTT CACTACTATA
GGTTTATCTA ACTGCTAGAG AGACCGGCTT TCGATTTCGT C
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| Protein sequence | MKYAVFASLL ASAAAFAPAA KPAASTSALN AEMSKSMPFL TAPKNTGGYV GDVGFDPLGF
SDNFDMKWLR ESEIKHGRAA MLATVGFVMQ QFWTLPGMVH VDDSNLAPGA AGISPMLQIV
FGMGALEWWT NKGKVTMEDM FSDSSREPGN LGFDPMGMSK NKSKEEAEAM QLKEIKNGRL
AMLAIGGMIH HNWVTGEALF
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