| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_44591 |
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| Symbol | |
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| ID | 7197610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011672 |
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| Strand | - |
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| Start bp | 987391 |
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| End bp | 990639 |
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| Gene Length | 3249 bp |
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| Protein Length | 972 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002178620 |
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| Protein GI | 219115649 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CCGTAAGGGC TTGCTTTCCT AAATTTTGGA GGCCATCACA ACCAAAACGA CTTTGTACAT
CTCAGTCTCA CAGTCAATAT CCTCTTCGGC ATTATACCTT CTCCTAGGCT ATCAACGAGT
GGAAAAATAA AGTCCTCGGA AAGAATCTAT TCGCAAAAGG CTCCCAACCA TAGCTAAATC
GCCTTTGGAG TATTTGTTCC TGTGACGCAT CCTGTACAAG AAAGCAATCA TTCAAAACGG
TCCGTATCGA GTCCGAGGAA ACAAGCACCG TAGAACAATA GCAAGATTTT TCCCTCTCGC
CGTCGCCAGC GAAGGAAAAA ACTCTCCGTC ATGACGAGCG CGCGCGAGAG GTCCAGTAGT
GCTGGCGCTG GTGTCCCCCA CCAGCGTGAT CTACCAGTTT CTTTTCATCT CGCAGGGGAT
GCTCAAATTG ACGAGACTAT TAGTAACGGT CGTATGCGAG CAAATACGGC ACCATCGATA
GTTGATGAAG AAAGTGACAC AGTCCAGCAC CAGGAAAAAC AAGACATTCC TGAGATACCG
CCTTCAGGGA GTTCGGAAGA TGAAGAGCTG AAGCTGGCGC AAACAATGGC GCTTGCGATA
CAAAACAATC CCAATCTGAC TCGAGATGAA ATTCGTAAAT TGATTCAGAC AACTACAGGG
GGTACCAAGC CAGCTTCTTT GATGAGTACT AACAATGGAA GTGAGACTTC TGGTTCGGCC
GTCCTCCAGC CATCGTTGTT GATTCCGGGA AGGCTGATGT CGGGGTTTTT TCAATCGGAC
GAGGCCGAAA AAGAGGGAGA TAATGTAAGT TCTGGGAAAG ATGGTAAGAA AAAGTCGTTT
CGATTTGATG GAAGCTTGCG TGAACGCGCC AAAGGAAGGC TTTCAGAAAT TTGGACGTCG
AGCGGGGCCA ATAGTAATAG TATCCGTGGT AAAGAGGAAG GTGATATCAA GGACGCTCAG
GCTTCCGGTC ACTCTAGTCT TTCATCCACC ACGGGCAGAG ACAATTCGTC GCGGTCTTCT
TTTCGTAAAG AGAGGAATCA TGTACGATCT CCACCTGTCA GTCCCTTGAC TACGCCAATG
GTCATAGCTG ACGATAACAA ATTCAAGAGT ATCGTTTCCC CTGCGAGTGC TTCGATGACG
ACAAGTAAAT CCGTACCGAT ACGTATGATA GGAATTGCCT GGAAGCGGCG CGGCGGCATG
GGAAAATACT CTGCAAATGG GGCCTGGGAG CGTCGTCGTA TCGAGTTGCA AGGAACCAAA
CTGCTTTACT ATCGGACCGA CGGAGACACG ACTTATGAGC AAGTTTCACC TTCAGCATCG
CGTGACGATG CTTCCTTGAC CGCCTCCGCC GTTATGCCGT CTATGGATGA TAACAACAAT
CCAGAAGGTG TAGTCATTGC CCGTCGCCAG ACTTGGCTTG AATCTGCTAC TTCCAAGGCG
GCCTCGAGTT GGGTTGTCAA CGATCAAGAC CACACTACTC CTCGTGGACA CATTGATTTG
GCCAAGGAAA AGGCGACAGT GAATGCTGCC TTTGGGCATT CAAATGCACC TTCGCCCTTC
GCCATCTCGA TCAAAGTCCG CGCGGAAACA AAATGGAAAT TGTGTTTCGA CTACCATCGG
ACCCAAATGG AATGGTTAGC TGCGTTGACA GATGTAGTGG TTCAAGGCAG TGTAGACTCA
TACAATTCCA ACATCTTGAT AGCAGCCGAT CCCTCGAACC AGACAGAATC AGCTCTCTTC
CATCCGCCGC AGGTGAATCA TCCTCCCACG GACAGCAACG AACCAGCTGT GTCGCGGCGT
TTGTGGATGA TGGAGAGTTA CACAGTTTCT ACAACGCAAA ATGTAGATAA TGATCACTCG
GACAGTGAAA ATGAAGACGA TAGCGAATCT TCGTCCCTAG ACGAAAGAGA CGATGATGTG
GAGGAGTCTG TCACAATTTC CCGGGGAGCA TCGGATCCGA TGACCTTATC GGCATCACAC
ACAAGTATTG TTGAAGGAGC GAAGAAGGTA CTTTTCATTC CCGAACGATA TCTCGCTTTC
GTTTCAGGAA TCGTCAATGC ATCATTGGCC TATGCTCGAG CGTCTTCCAC TTCCACAGAA
AATTTTTGGT ACGCTGTTGT CGTCGTAAAT TTCTGCGTTT TGTGGTGTTT GGTGAAAGAA
CCCGATTGGA GGGGCATGGT TTCTCAGCCA GAAATGAGAA GCGCTCAACC TTCGCGTTGT
GACAAGCAGC AACGGCGTGA AAACACGAAG CGAAAAGCAG CAGCGATAGA GCCAAAGTCT
ACTGTAACAG GAAGATCAAC GGATCCATCT GCTTATATAC CCATGGCCGG ATCAACAACA
GTGAAGCTCA AGCACACAAC GGATCTTCCC GTAAACGATA AAAATGAGGT TTTTGCTGGA
TGGTGTGATC CGCCAGGAAA TATTTTGGCT GTTCGGTCCC ATGGATATAG TTTGACGAAG
AAGAAAATTC CGTCGCCTGG TAGTCTCTAC AACTGTGCAA GGGTGGATAT ATTTGAATCC
CCAAGTCGGT ATCCCGATAT GGCGCTTCGC GTCAAACTCC CATCGGTGGA CTTCAAAGAC
GATGACAGGC CGAAAACGTG GAGGACACCA GATGTTCTGA TTGTCAGTAT TGCTTTGCCA
ACGGACCCGC CCAAGCTTGG TCGGTCCAGC AGCGATGGAG GCGGATACAC AGTTACGTGT
TACTTCACAA TGACACAGGA AACACGCGAT ATTCTACGTC GTGTTACGGC AGATGACTAT
GATCCTTCAA AAGAGAACAT CGATGACATT CAAAAGAGTA CAGTCAACGC TGTTCGACTA
CTAGAAGAGT GGGTTCGAAG GGCTCCAACG GATCCGTCAT GGTTTTCTCG TTTCAAGGTT
GTCCCCAATG CTCACAACTT GAAGGAAATT GGCATGCCGG CATGGATATC AAAATACAAC
GGTAAGCCTT TTTTGATCAA ACGCCCTGGA ACAACTGGTT TTATTTTCGA ACATCCCGAG
CTGTCTTGTT TGGAGTTTGA CGTCTCGCTG CACCCTTTTC CGTATATTGC CAAGCAGGCG
ATATGTTTTA TGAAGGAAAG CTATTTCAAA AAGGTTCTTG TCAGCTTTGG TTTTGTTATT
GAAGGGAAAA GTGACGATCA ACTACCGGAG TGTGTCATTG GGTGCATGCA GCTTTGTTAT
CCTGACCCAG CTCACGCTAT CTCCGGGGCA TCGTTTTTCG ACGGCACTTC GAAACGATCT
TTCCAGTAG
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| Protein sequence | MTSARERSSS AGAGVPHQRD LPVSFHLAGD AQIDETISNG RMRANTAPSI VDEESDTVQH
QEKQDIPEIP PSGSSEDEEL KLAQTMALAI QNNPNLTRDE IRKLIQTTTG GTKPASLMST
NNGSETSGSA VLQPSLLIPG RLMSGFFQSD EAEKEGDNVS SGKDGKKKSF RFDGSLRERA
KGRLSEIWTS SGANSNSIRG KEEGDIKDAQ ASGHSSLSST TGRDNSSRSS FRKERNHVRS
PPVSPLTTPM VIADDNKFKS IVSPASASMT TSKSVPIRMI GIAWKRRGGM GKYSANGAWE
RRRIELQGTK LLYYRTDGDT TYEQVSPSAS RDDASLTASA VMPSMDDNNN PEGVVIARRQ
TWLESATSKA ASSWVVNDQD HTTPRGHIDL AKEKATVNAA FGHSNAPSPF AISIKVRAET
KWKLCFDYHR TQMEWLAALT DVVVQGSVDS YNSNILIAAD PSNQTESALF HPPQVNHPPT
DSNEPAVSRR LWMMESYTVS TTQNVDNDHS DSENEDDSES SSLDERDDDV EESVTISRGA
SDPMTLSASH TSIVEGAKKV LFIPERYLAF VSGIVNASLA YARASSTSTE NFWYAVVVVN
FCVLWCLVKE PDWRGMVSQP EMRSAQPSRC DKQQRRENTK RKAAAIEPKS TVTGRSTDPS
AYIPMAGSTT VKLKHTTDLP VNDKNEVFAG WCDPPGNILA VRSHGYSLTK KKIPSPGSLY
NCARVDIFES PSRYPDMALR VKLPSVDFKD DDRPKTWRTP DVLIVSIALP TDPPKLGRSS
SDGGGYTVTC YFTMTQETRD ILRRVTADDY DPSKENIDDI QKSTVNAVRL LEEWVRRAPT
DPSWFSRFKV VPNAHNLKEI GMPAWISKYN GKPFLIKRPG TTGFIFEHPE LSCLEFDVSL
HPFPYIAKQA ICFMKESYFK KVLVSFGFVI EGKSDDQLPE CVIGCMQLCY PDPAHAISGA
SFFDGTSKRS FQ
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