Gene PHATRDRAFT_44586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_44586 
Symbol 
ID7197606 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp979168 
End bp980648 
Gene Length1481 bp 
Protein Length344 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178616 
Protein GI219115641 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGTCAC GTTACAAACT AATGTTCTGC CCAGTGACTT TTTGCACGGA ATCGGGCGTT 
TGCCGTTATT TTATGATTGT TCTCTCGTCA AATCACAAAT CGTCATTCAA AGTCGGCGAC
GACATCCAAA AGTCATCGCA CGCGCATCGT AGTGACTTTT GGAATTGTAT GGATTCGAGA
ATACCAAATT TTTCGAAACC GTCAAATTCG AAAAAATGCT TTCCTCGTGC CCCGGCAGAG
CTCGGACGGA GTGGTGCCAA GAAAAACGAT TTGCCCCTCT TTCCACCGCG TTTACACACT
GTAGCAGCGA GCGTTGTCAC AAAGACGAGA CTATTGGTTC CCAAAATCCT TCGCTTGGAT
CCGAAGATAT TAATTGAAAG TATGACTGAA GGCAAAACTG ACGAGAAACC TATTGAAGAT
GCCCAGGTGG CGACTGGTGC TGCCACGGGA GGGGAAAAGC CTGATAGAAT CAACACAGGT
GATGATTCTG GCGACAAAGA CGACTGCTCC GATCTTACTG ACAATAACAA CCCTGAAGGC
GAAGAGCAGG CTCCCAAGAG CTTTCCCCAA AAAGTGAGTA CATCCGATAT TGTGATACAG
AAGAGCCATT GCTGGAGTTG ACGACGGTCT CAGCGACCTG CCCAGGGACG GTCTTCATGG
TGTCGCAATA AGAACGAAGC GAAACATTCT CTGTAGAAAA TGTACCATGT TCTACGCTGA
ATCGATAAAC GTAGACGAAT CGTTTTGGGG CGACATCCTC ATTTTGGCCA TTTGCACGAT
GATTTTGGTC CGACGTCTTA CCCTTTGTCT CTCTCTATAC AACGTAGTTG ATGGATATCC
TTTCCAATGA GGACAATACG GAGATTATTT CCTGGCTCCC TCACGGAAAT GGTTTCATTA
TCAACAAGAA GAAGACTTTT GCCAACGACG TACTTCCCAA GTATTTCAAG GCTAGTAAGT
TCACGAGCTT CACTCGCAAA TTGAACCGCT GGGGTTTTAC CCGCGTCCCT CGCGGGCCAG
AGACTGGTGC CTACTTCCAT AAGCTGTTCC GCCGTGACAA GCCTGAACTC TGCTTGCAGA
TGACAAGCAA CTCAGGCAAT AAATACCAAA CTAGTCCAAT GCAGCAACAG CTTTTGCCGA
ATGTTCCTGG AATGATGCCG GGAATGCCAA TGTACCCATT CATGCCTAAC CCAATGATGG
CGAACATGTC ACCGCAGCAG CAGCAGGCTA TGTGGCAACA GCAAATGCAG CAGATGATGC
AATTTCAACA AATGCAAATG ATGCAGATGC AGCATGGCGG TGTACGTCCC CCTATGCCTG
GTCAAGACAT GCAGGGATCT GGTGGTGAAA AATCCTCAGA AGCTGGCGAA GGTGCGGATT
CCAAGCCCAA GGAAGAAACC GGAGAAGAAG CGGATGCTAG CAAAGAGCAA GATGAGGCAC
AAGAGTCGAT TATTAAACCG AAAGCTGTGG ACGAGGTTTA A
 
Protein sequence
MRSRYKLMFC PVTFCTESGV CRYFMIVLSS NHKSSFKVGD DIQKSSHAHR SDFWNCMDSR 
IPNFSKPSNS KKCFPRAPAE LGRSGAKKND LPLFPPRLHT VAASVVTKTR LLVPKILRLD
PKILIESMTE GKTDEKPIED AQVATGAATG GEKPDRINTG DDSGDKDDCS DLTDNNNPEG
EEQAPKSFPQ KLMDILSNED NTEIISWLPH GNGFIINKKK TFANDVLPKY FKASKFTSFT
RKLNRWGFTR VPRGPETGAY FHKLFRRDKP ELCLQMTSNS GNKYQTSPMQ QQLLPNGSGG
EKSSEAGEGA DSKPKEETGE EADASKEQDE AQESIIKPKA VDEV