Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_44586 |
Symbol | |
ID | 7197606 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011672 |
Strand | - |
Start bp | 979168 |
End bp | 980648 |
Gene Length | 1481 bp |
Protein Length | 344 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178616 |
Protein GI | 219115641 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGTCAC GTTACAAACT AATGTTCTGC CCAGTGACTT TTTGCACGGA ATCGGGCGTT TGCCGTTATT TTATGATTGT TCTCTCGTCA AATCACAAAT CGTCATTCAA AGTCGGCGAC GACATCCAAA AGTCATCGCA CGCGCATCGT AGTGACTTTT GGAATTGTAT GGATTCGAGA ATACCAAATT TTTCGAAACC GTCAAATTCG AAAAAATGCT TTCCTCGTGC CCCGGCAGAG CTCGGACGGA GTGGTGCCAA GAAAAACGAT TTGCCCCTCT TTCCACCGCG TTTACACACT GTAGCAGCGA GCGTTGTCAC AAAGACGAGA CTATTGGTTC CCAAAATCCT TCGCTTGGAT CCGAAGATAT TAATTGAAAG TATGACTGAA GGCAAAACTG ACGAGAAACC TATTGAAGAT GCCCAGGTGG CGACTGGTGC TGCCACGGGA GGGGAAAAGC CTGATAGAAT CAACACAGGT GATGATTCTG GCGACAAAGA CGACTGCTCC GATCTTACTG ACAATAACAA CCCTGAAGGC GAAGAGCAGG CTCCCAAGAG CTTTCCCCAA AAAGTGAGTA CATCCGATAT TGTGATACAG AAGAGCCATT GCTGGAGTTG ACGACGGTCT CAGCGACCTG CCCAGGGACG GTCTTCATGG TGTCGCAATA AGAACGAAGC GAAACATTCT CTGTAGAAAA TGTACCATGT TCTACGCTGA ATCGATAAAC GTAGACGAAT CGTTTTGGGG CGACATCCTC ATTTTGGCCA TTTGCACGAT GATTTTGGTC CGACGTCTTA CCCTTTGTCT CTCTCTATAC AACGTAGTTG ATGGATATCC TTTCCAATGA GGACAATACG GAGATTATTT CCTGGCTCCC TCACGGAAAT GGTTTCATTA TCAACAAGAA GAAGACTTTT GCCAACGACG TACTTCCCAA GTATTTCAAG GCTAGTAAGT TCACGAGCTT CACTCGCAAA TTGAACCGCT GGGGTTTTAC CCGCGTCCCT CGCGGGCCAG AGACTGGTGC CTACTTCCAT AAGCTGTTCC GCCGTGACAA GCCTGAACTC TGCTTGCAGA TGACAAGCAA CTCAGGCAAT AAATACCAAA CTAGTCCAAT GCAGCAACAG CTTTTGCCGA ATGTTCCTGG AATGATGCCG GGAATGCCAA TGTACCCATT CATGCCTAAC CCAATGATGG CGAACATGTC ACCGCAGCAG CAGCAGGCTA TGTGGCAACA GCAAATGCAG CAGATGATGC AATTTCAACA AATGCAAATG ATGCAGATGC AGCATGGCGG TGTACGTCCC CCTATGCCTG GTCAAGACAT GCAGGGATCT GGTGGTGAAA AATCCTCAGA AGCTGGCGAA GGTGCGGATT CCAAGCCCAA GGAAGAAACC GGAGAAGAAG CGGATGCTAG CAAAGAGCAA GATGAGGCAC AAGAGTCGAT TATTAAACCG AAAGCTGTGG ACGAGGTTTA A
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Protein sequence | MRSRYKLMFC PVTFCTESGV CRYFMIVLSS NHKSSFKVGD DIQKSSHAHR SDFWNCMDSR IPNFSKPSNS KKCFPRAPAE LGRSGAKKND LPLFPPRLHT VAASVVTKTR LLVPKILRLD PKILIESMTE GKTDEKPIED AQVATGAATG GEKPDRINTG DDSGDKDDCS DLTDNNNPEG EEQAPKSFPQ KLMDILSNED NTEIISWLPH GNGFIINKKK TFANDVLPKY FKASKFTSFT RKLNRWGFTR VPRGPETGAY FHKLFRRDKP ELCLQMTSNS GNKYQTSPMQ QQLLPNGSGG EKSSEAGEGA DSKPKEETGE EADASKEQDE AQESIIKPKA VDEV
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