| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_44585 |
|---|
| Symbol | |
|---|
| ID | 7197605 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011672 |
|---|
| Strand | + |
|---|
| Start bp | 976680 |
|---|
| End bp | 978027 |
|---|
| Gene Length | 1348 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | |
|---|
| GC content | 44% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002178336 |
|---|
| Protein GI | 219115081 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGAGAA TAAAACGTTC TGACTTCACA GTAGCCTGAA AACGATGGGG ATTACACTAT
GGTCCTAGAA AAATCATGGC GTAGGACTGA CTAGTATCAG TAGAAAAACT TAGTTTCCTC
TGACCTGACC GTAAACCCGC TAGGCAGCCA CTTTAGGCGC CAACTCATTG AGGCCCGATC
TTTTCGATAG CAAGGATGTC AACATCGGCT CACTGTCAAG AACCAAGCGT ACAACGTTGC
AACAAGCAAA ATCAATCTGC ACTTGGCAGA CCTCCAGCAG TATCGAGTCT TCTTTTTCCC
AGGATGATGA AAAACTTGAC CGCCTTGCTT TTCTTTGTAG CGACGGTGTC CGCTTTTGCT
CCTCACCGTT CAAGGGCTAA AATTGCAAGT ACCACTTCGC TAGGAATCGG TGGTTTATTC
CAAGGGTTGT TTGGAAAGAC AGATGCAGAA ATCACGGATA CAGTCTTCTT TGATGTGTCT
ATCGACGGCG AACCTGCGGG ACGAATTGAG ATGGGTCTGT ACGGATCGGT TGTTCCCAAG
ACAGCGGATA ATTTCAAGCA GCTTTGTGAA GGCAAACCTG GGTTCGGATA CAAAGGAAGC
AAATTTCACC GTATCATTCC CGGCTTCATG TGCCAAGGAG GTGACTTTAC TAACGGTGTG
TATATGCAGC AATGATAATT CTTGAAGCGT TTGAAATAAT TCTTTTTGAG CTTCTCATCT
TGCTGACCGC ATGCAACAGG AAATGGAACA GGAGGCAAGA GCATTTACGG TAAGTGTGTG
TCAGCGTATG CAGTCGCTTT GCATAACACA TTTTTTTCTA ATCAGTAGCA ACATTCTTCT
ACCAAGGCCC CAAATTCAAT GATGAGAATT TCGATATCGC CCACGGAGGC GCTGGAACGC
TTTCGATGGC CAACGCAGGT CCCAATACAA ACGGAAGCCA ATTTTTCATT TGCACAGGAC
AAACTCCATG GCTAAACGGC AAGCATACCG TCTTCGGAAA GGTGAGTTCG AGTGAAGGTT
TCTATTTCTT ACTGAGAATG GCATTCTAAG GTTTTTCTTC GGTTTTGACT GTTAAAGGTC
ACAGACGGCT TGGACATCGT CCGCAAAATC GAAACAAAAG GGTCAGAAAT GGGAAAGCCC
AGAGCGGAAG TTAAGATTAC CAACTGTGGA TCTTTGTAGA CAATTGAATG CAATAGGCTA
AACTGGTATT CGATTCTATT TTGCGGACTA AGAACTCAAT CCAGCCAGTC TTCACCTTTC
CAAGGCTGAC TCAATTTCAT TGGACGTCCA AAATAACAAA GTGGAGCTAT TCGTCAATAT
TTTTTAACTC TTTGACTTCT TTTTCTTG
|
|---|
| Protein sequence | MRRIKLFFDV SIDGEPAGRI EMGLYGSVVP KTADNFKQLC EGKPGFGYKG SKFHRIIPGF
MCQGGDFTNG NGTGGKSIYG PKFNDENFDI AHGGAGTLSM ANAGPNTNGS QFFICTGQTP
WLNGKHTVFG KVTDGLDIVR KIETKGSEMG KPRAEVKITN CGSL
|
|---|
| |