Gene PHATRDRAFT_44564 details

Gene Information

• Locus tag: PHATRDRAFT_44564
• ID: 7197803
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011672
• Strand: -
• Start bp: 909420
• End bp: 911415
• Gene Length: 1996 bp
• Protein Length: 582 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002178601
• Protein GI: 219115611

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GAACGTACAA GACTTGGTGT CTTTTCAGAG AAAATTGGGA AAGTGATATT GGGTGGTCTT 
CGACGCAGTT TTTCTTGACC GAGACTCTTG GCTGTCTACT GCAAATTCTT CTTTTCATTA 
CTTCAGCTGC GGTCGTCCTA TTTCGTCGGT TACGAGCCTA CAAAACATTG AAGCGACGCT 
TTGGATCCAT TCCGCATACT ATGGCTAGTA ATAGTGATGT TGAGTTTTCA ACGAATCATT 
CACGCTGCGG TTTTCCTATG GCTGTTGTAG CTCACGCTTT TTCCGGTTAC GGCGAGGGAG 
AAATGCCGCG ATCGAAAGCC GAGCTGGAAA TCATGCAGCT AGCAGGCTCA ATTCGGGATA 
AACCACTTTG GTGGAATAAA GTTCGCGATC CTTCCATTAC CAATCGCTGG CAAGCCGAGT 
CGCTGAATGG TGTCAATGAT TCGGAAGCTG ACTGTGAATA TCGTACACGA CAATTTCTTT 
TTGCGCTTAG GGAATGCCAG TGGCAGGCGA TGCAATATCC GGGACCAGGT CGTCCAGCGG 
CGGTCGATCG AGCCTTTTCG AGTGATGGCC ATGATGAATC CGAGCTCTGG TCCAAGCTGT 
TGTCTGAAAT CAATAAGTTA CGATCGCTAC CAGCGGTTGG GTCGAACAAG GAAGATCGTC 
ATCCGGGAAC TCCTCAGATG GTGGACCTAG TCCATCCTTC TCTTTATGCA TATGAGCGAG 
GGAAAACAGA AGTCCTGCCT CACGTGCCCG CTAGTATGAG CCAGATGCCA CATTGGGATA 
ACTTCTTGGG TGTGGCCGGT GTCACTGAAA TACCGCCAAG GAAGATCGAT GGCCAAGGAT 
TTTTTTCACC GGGCGGCCTA CAGTGGCTTC CTGCGGAATT CAGAGTCAAC GCTGCTGGAG 
ATTCATGTAA AATTAGTTCG TACATCAATT CACTCCATCC GACAGAGTTC GCGGAGTTGT 
ACGATTCCAT CGGAGAGTTG TTTTGCAGGG CGCTTCCCCT TTTGGAAAAT ACCTTGCGGG 
AGGCTGGTCA TGGACCTTTG GAAGACGGCG AACACTGGCA AAAGAACTAT CGTGAACGTG 
ACCACAGAGT GCCTATCGTG TCTGATTGGT GGGAAGCGCC TCGAAGTCAG CTGGAGGGCG 
AAGATGACGA TTTATATTAT GATTACCTGG ATGACTTTCA TGAGATTCGA GAGTTTATTC 
CGCCTGAAAT ACCAGACTTC ACGCCCCCAT CGTATAATGT GCCAGAGGCT GATGTTTCCT 
TGCGAAACTG TCCCCTCCAA GTGATTGTCA AGGTTGCGTC CTTGGAGATT GAACCGGGAG 
AATCCTACGA GGGGGGAGTT TGGCATGTAG AAGGTACTCT AGATGAACGG ATAGTGGCAA 
CGGCCTGTTG CTATCTAAAT AACACGAATG TGCAAGGTGG CGATCTGGCT TTCCGCGTGG 
CAGTAGCCGA GCCAGATTAC GAGCAAGGCG ACGACACGGG TGTAAGGAAT GTCTACGGTT 
TGGAAGATGA CGAACCGTTG GTTCAATTTA TTGGCAGCTG TAGCACTCCG ACTGGACGAA 
TACTGGCCTG GCCCAACACG CTGCAACATC GGGTAGGACC CGTTCGTCTC ATTGACGAAT 
CAAAATATGG AAAGCGCCTC ATAGTTTGCT TTTTCCTTGT GGATCCAACG CTACGGATCC 
GTTCGACGGC AACCGTACCA CCGCAACAAC TTGCTTGGGT ATCCGATATG TGCAAACCAA 
TCCTGAATGT GGTCGGCTCA GGTGCTGCTG AACCAGGAAT TCAAAATATG ATTGTTGCAA 
GATTGGCTTC CCCTTCTTTG CTTACCTATG ATCAGTCGTG CGAACGTCGT AATCGTCTTA 
TGGAGGAAAG GCGTGCAATA TATGAAAAAA CTGGTGGATA CGATCATCAA AAATTTTACG 
AGCGACCGTT CTCTCTGTGC GAACACTAAC TAACTGTAAA TCATATGAAA ATGAGAAAAG 
AACTTTATAA TGCGTT 

 

Protein sequence

MASNSDVEFS TNHSRCGFPM AVVAHAFSGY GEGEMPRSKA ELEIMQLAGS IRDKPLWWNK 
VRDPSITNRW QAESLNGVND SEADCEYRTR QFLFALRECQ WQAMQYPGPG RPAAVDRAFS 
SDGHDESELW SKLLSEINKL RSLPAVGSNK EDRHPGTPQM VDLVHPSLYA YERGKTEVLP 
HVPASMSQMP HWDNFLGVAG VTEIPPRKID GQGFFSPGGL QWLPAEFRVN AAGDSCKISS 
YINSLHPTEF AELYDSIGEL FCRALPLLEN TLREAGHGPL EDGEHWQKNY RERDHRVPIV 
SDWWEAPRSQ LEGEDDDLYY DYLDDFHEIR EFIPPEIPDF TPPSYNVPEA DVSLRNCPLQ 
VIVKVASLEI EPGESYEGGV WHVEGTLDER IVATACCYLN NTNVQGGDLA FRVAVAEPDY 
EQGDDTGVRN VYGLEDDEPL VQFIGSCSTP TGRILAWPNT LQHRVGPVRL IDESKYGKRL 
IVCFFLVDPT LRIRSTATVP PQQLAWVSDM CKPILNVVGS GAAEPGIQNM IVARLASPSL 
LTYDQSCERR NRLMEERRAI YEKTGGYDHQ KFYERPFSLC EH