| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_44537 |
|---|
| Symbol | |
|---|
| ID | 7197789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011672 |
|---|
| Strand | + |
|---|
| Start bp | 837946 |
|---|
| End bp | 839323 |
|---|
| Gene Length | 1378 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002178314 |
|---|
| Protein GI | 219115037 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTTGT CCATTCGTCT CGTCTTGCGG TGTTGGTGGA TAGGGGCGAT CGGACTCCTC
GCCATCAACC TCTATACATT CAACAGCCGA AATCTTTCCC AGGCTCTCCC GCCGAAACGT
CTCGGTTCAG AAGTTGTTTC CCAAGAGATC CCTGTACACG GCGTTGGCGC CAGCCTCGAA
ACTAGCTTGC GGAACGGCAA CGGTAGCGAC TACGACCAGT ATAATTTCAA GATCCACACC
CTGTCGAGTC CTTCGTGTTC TCCTCTGGAA GAGAAAGATG TCGACTTTAC CTTGGTCACG
CAGCTCTCCC CCAGCCGACT AGCGATCATG GAACAACACT GCGAGCGCTG GGGAAATCAT
CCCATTTCTC TCGCAATCGG AACTACGGAG GATATCGAGA ACATTGAAAA GACCCTGTCG
GAGTTTGGTT GCCAAAAAAA TTTGGTCACG GTGAGCTTTG TGAGCGACTT CAATTCCGAA
GGAGAATACC CCGTGAACCG ACTCCGCAAT CTTGCCATGT CTCGGGTCCA GACGAGCCAC
GCTTTCGTCA TTGACGCTGA CTTTGTTTTG TCGACAAATC TCTACCAGAT GCTCCGTCTA
CATCGGGCTA TGCTTGCTAC GGACCACTTG CATACTTTGG TGGTACCAGC CTTTGAACTC
CAAGCGGTTT GCAATGAGCA AAACGAAAAT TGCACAGCCA AGCATTTGGC AATGCTTCCG
GACACGAAGA ATGAGCTGGT GAAGCAGTAC TGGACGGCAA AAGACCATGT CGGCCCCAAT
CCCAGTGTGA CGCAGTTTAG AGAACAAGCT GCTTTTCATG CGCACGCCAG TACGCGCTAC
GAAGACTGGA TGACACAACC TGCAGAAAAG CTCCTCCCCA TCGAGTGCGT GACTTCGGAT
AGCTACGAGC CCTACCTCGT TGTCCGTCCT TGTCAATTCC TCGCACCCTT TCAAGAGGCA
TTCGTTGGCT ACGGTCAAAA CAAACTGACC TGGTTCCAGC AAGTCCGACG TATGGGGTAC
AAGTTCTTTC AGATTGGTGA AGGCTTTGTC ATTCATTTTC CCCACGCCCG GTCGGTAGCG
TCCGTCCAGT TCAGGCAGAA TGGCAAAAAG AACCCTTTTG GAGTGGGAGT GAAAGAAACT
GCTTCCGCTT TCAAGCAATG GATGAAAGAA CATATTCCAG ACTCAACTCA AATTCCGTAT
TGTTCTTAGG GCATTTTTCC GCGTCCGAAT CAAATCTAAA TCCTTCATGA CGAATCAGCT
TTTAATGTTG ATCAGCTTCA TCAAATGTAG ATAAACATCA CCATCGTTTC TTAGACAACG
ACGAAAAATG TAGATAAATA TCGTCATCGT TTGTTTAGAC AACGACGAAC TATCCGAA
|
|---|
| Protein sequence | MILSIRLVLR CWWIGAIGLL AINLYTFNSR NLSQALPPKR LGSEVVSQEI PVHGVGASLE
TSLRNGNGSD YDQYNFKIHT LSSPSCSPLE EKDVDFTLVT QLSPSRLAIM EQHCERWGNH
PISLAIGTTE DIENIEKTLS EFGCQKNLVT VSFVSDFNSE GEYPVNRLRN LAMSRVQTSH
AFVIDADFVL STNLYQMLRL HRAMLATDHL HTLVVPAFEL QAVCNEQNEN CTAKHLAMLP
DTKNELVKQY WTAKDHVGPN PSVTQFREQA AFHAHASTRY EDWMTQPAEK LLPIECVTSD
SYEPYLVVRP CQFLAPFQEA FVGYGQNKLT WFQQVRRMGY KFFQIGEGFV IHFPHARSVA
SVQFRQNGKK NPFGVGVKET ASAFKQWMKE HIPDSTQIPY CS
|
|---|
| |