Gene PHATRDRAFT_44530 details

Gene Information

• Locus tag: PHATRDRAFT_44530
• ID: 7197786
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011672
• Strand: +
• Start bp: 817591
• End bp: 819648
• Gene Length: 2058 bp
• Protein Length: 685 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002178311
• Protein GI: 219115031

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTTCGG CCAAGCTGTC ACGAGGGAAG AAATGGCGTT GGCGTCTAGT TGTGATGGCT 
ATTCTGGCAA GCCTGGCGCT TTCGGTGGTG AGGCGGCTCT TTTTTCAAGA ACGTCAAACG 
GTACAGTGGC TTCCACCTTT GGCCATCGAG AATCCTACAT ACTTTTCCGC ATTCGAGGAA 
GAACGCATGC CTACCTCATC CAGCGATGAA GCATGTCAAA CTCCACTTGT AGAGGACACG 
AAAGAGGATT CCCGGAGCGA ACTGCTGGTC GACGGCTCGG ACTTTGCTGC CGCAGCTCGC 
GCCCGCACAT CCTCCCACCC CTTCTGCCAA AGATTCCGGT ACGAACAGTC AGCAAGTGCG 
CTCTGGTCCT CGCATCGAGA AGCGATTATG AATAAAACCA ATCATGCCAA CGATGAGGAC 
GGGCGACATC GACCATGGAT AGAGAAACTC TTTGACACGG TGAGTCCCTT CTTGTTGCAA 
CGCGGACTTC GCAATCCACC GAATGCGGCG GATACGAAAC GCGTTTTAAA TATTGTGGAA 
ACCAAGCTAG CCAATTCATC GGCGCCGCCC TTGTATGTCG CTGTATTTGG AGGATCAGTG 
GTGGAAGGGA CTAATTGCGA TTTTATTCCC CCGGCTGCAC TCGAACTAGT GACGAACCGT 
TCTTTACTCA GAGAAAGAAA GAGAAATATG TACGATACTG TTATAAAGGG AAGAAGCTGC 
ACTTGGCCCA ATCGATTGCA AGCCCTAGTC GATTACGCAC TGGGCGAAGG AGTCGTGAAG 
ATTTACAACC TCGGTGTCGG AGGCACCAAT TCACAACTGG CGGTCCCGAT TGTCAAATAC 
CGTCTCTACT CGGGTGCGGC GGATCTAGTG AATATAGGTG GACCCGATGT TGTCATCAAT 
GGATATGCCG TCAACGATAA TGCCTATTTT TCGAGCACTG CCGCGACGGC AACGTACACT 
CACTTTAACG CATCGCTCGC TCGCGCGGAG GACTTCATTC GCGCGGTTTG GAAGTCGCGC 
CCCTGTCACG ATCCACCAAT GGTTTGGTTT TTTGACGAGC ACTTTGGTAA TTACATCGAA 
AGTCTCCTCG GTGAAGACAT ACAAAAGGAT GCGGTCCGTC TCTTGGCGGA CTACTATGAG 
CTTGGTTACG TCAGTTCGTC CTTTTCCGTG CGCTCTTTCT TCCTGTCTGA CCCGGACGAA 
ACCTTGTTTT CTCCTGATTG GGAAGATCCC GTCAAAAAAT CTCGCATCGT GGACGGGCAT 
TTTGGAATGC CCGGGCATGT TCACGCATCG TGGACCTTTG CATACGCAGC ATTGCAAACC 
GTACTCGACT ACTGCGCCGA TCATGCCTTC ACGGATAGTA TATCTACAAT ACGGTTACAG 
GACGGCCAGT TTACCTCGCA GCTCGCCGAC ATGCAAACGT TGCTGGATCG TACCTACCTG 
CCGCCACCAC TCGGTCAGGA CACATTGTCG CTTGTGAATA TTGCGAAAAC TTGGCGAGCA 
ACTCAGCAAC AGCAGTATCG TAGCGAAAAA CTCCTTTGCG AAGACGAAAT GAATACGCAA 
GGCACATTGT GTCCCCTGGC CTTCGTGGCA ACACCCGTGG GTACCACTCG TCAAGCCCGT 
GCTGTGGATG ATTACTTAAA ACCCTTTGTG ACAGTCAACA CTGGCTGGTA TGGCAGAAAT 
GATATCCGCA ACGGCTGGCA AAATAAGATC GGTCTCATGC CCACCGGTAT CGGTGCTTCA 
ATTATCTTGT CACTCGAGCA CGTCACAACT CTCATTCAGA TGATTTCCTT GCAGACCTTA 
AGAAGCTACG GTGATCCCTG GGAGGGATCG GAAGCATTGT TTGATTTGAC TATTATCCGA 
GGCAATCCAA ATTCCACCGA CTTCCGGGAC AATTTTACCA TTCCTGCCTA CCACGACGCA 
AACATGAGCG TTTCCTATTT GTACGAGCAC GACTTAGGAA AAAATCGAGC CGTTGCTGGT 
GACAGTCTTA CTCTGAATAT AACGCTGGTT GCTGGTTCTG CTTTCAAACT CATCGCATTA 
ATGATGTGCA GCGGCTAG 

 

Protein sequence

MASAKLSRGK KWRWRLVVMA ILASLALSVV RRLFFQERQT VQWLPPLAIE NPTYFSAFEE 
ERMPTSSSDE ACQTPLVEDT KEDSRSELLV DGSDFAAAAR ARTSSHPFCQ RFRYEQSASA 
LWSSHREAIM NKTNHANDED GRHRPWIEKL FDTVSPFLLQ RGLRNPPNAA DTKRVLNIVE 
TKLANSSAPP LYVAVFGGSV VEGTNCDFIP PAALELVTNR SLLRERKRNM YDTVIKGRSC 
TWPNRLQALV DYALGEGVVK IYNLGVGGTN SQLAVPIVKY RLYSGAADLV NIGGPDVVIN 
GYAVNDNAYF SSTAATATYT HFNASLARAE DFIRAVWKSR PCHDPPMVWF FDEHFGNYIE 
SLLGEDIQKD AVRLLADYYE LGYVSSSFSV RSFFLSDPDE TLFSPDWEDP VKKSRIVDGH 
FGMPGHVHAS WTFAYAALQT VLDYCADHAF TDSISTIRLQ DGQFTSQLAD MQTLLDRTYL 
PPPLGQDTLS LVNIAKTWRA TQQQQYRSEK LLCEDEMNTQ GTLCPLAFVA TPVGTTRQAR 
AVDDYLKPFV TVNTGWYGRN DIRNGWQNKI GLMPTGIGAS IILSLEHVTT LIQMISLQTL 
RSYGDPWEGS EALFDLTIIR GNPNSTDFRD NFTIPAYHDA NMSVSYLYEH DLGKNRAVAG 
DSLTLNITLV AGSAFKLIAL MMCSG