| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_44527 |
|---|
| Symbol | |
|---|
| ID | 7198063 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011672 |
|---|
| Strand | + |
|---|
| Start bp | 809000 |
|---|
| End bp | 813641 |
|---|
| Gene Length | 4642 bp |
|---|
| Protein Length | 1533 aa |
|---|
| Translation table | |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002178309 |
|---|
| Protein GI | 219115027 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGACAA ACGAACCGTT GCGTCCCGGA AGTGGGAGCA GTAGTAATGG GGGAAGGAGC
CGTTGTGGTA GTGACAGTAA TAGCCACAGT ACGAACCAGA ATACCGAAGG CAGCGTCACC
CAGGCTCCAG TCCTTGCACC GGAAGAAGGA CCTCCCGTGT TGCTGCGCGA ATGGAATCCG
GCACCGCCGC CGCCTTCCAC TCCGGTGGCT CCCGCCGTGA TCTGGCCCGA TCGATCCCCG
GAAGCGGAAG ATCGTCGACC TGCGTACTCG TATCCCGTAG CCACGTTTGT ACGCGATCTG
GTCCGTACGG GGATGGACCA AATCGAGTCA GCCTGGCAGC AACAAGAGTC GTCGTCGACT
GCACAGCGAG ATGGAACTGG TACACGCCCT CACGGAACCC ACAATCGAGT AGAAGACGAC
GACAGCGATG CCTATCGCCC ACTCTCCGTG CGTAGTGAGT CGGACGCTCT GGCCATGCGC
TCCGAGGCCG CGGCGGCATT TATGGAATCC ACGGCGACGG TGTCGGCCCG AACCATCAAT
GATCTGGACG ACGAACACGA GGATGCCGAA TTCATACTCG TTGACGGCGA ACTGGTGCTC
ATGCCGCCCC CGCCGCCCAA CGCGGCCGAG CAGGACGGTC TCGTCCGCCA TTTGCAGAAT
CAGGAATTTG AACGACACTT TTCGTTGCGC GCCAGGTATC ACCCCGACCA TCCCGCCGTC
AAGTCGTGTC AACCGAATCG CGTCCGCAGA GGTGTCCGGA AGCTTGGAAA GATTTTTAAG
CGTAAGAACG GTCTCCGTCG AGCGTCAAGT AAGGAAAGCG CGCAATCGCA TGTGCACCAC
GTCGATGACT CCTCGGCGCA CACCTCGCAC GACGGATCTT CGTTACCGTC TCTTTCCGCC
GACTTCTTAA CCGCGCCGTC GGGAGCTGAT TCTATAACCA CTCTGAATCA CACCACAAAC
AACGGTGGGA TCAATTCCAA CAATAATCCC AAATCTCCCC CCAGGAAGAA AGACAAACGC
CGTGGAAAAC GACGTTCTTG GCGGCGGACT GACAGCAGTG GTGGAGAGAA CGACGACTTT
GATGACGAGA CGTCGCCAGA CATATTCGAA AGCCGTTCGG GTGAATTCTC GTCGCGTACG
GGTCCGCGCC CTGCCACTTT TACCACAATT TCTGCGCTCG CCAATCGGTC GGCCGCGTCG
ATTCGACCCC CTATGCCTCC CATGACACCG ATTCAGGAAA CCTTGGACGC GAGCAACATG
TTTTCAGGAG GAAGAGCTGC GTCCGTCGAA GCCAGATTTG TTGGGACAAC GGCGGACGTT
CTCGAGGCTG GTGTCCTGCC GACCGGCTTT GCTGCGGAAG CCTACGTAGA ATACGACAGC
GACGAGGCCT TGAAAAAGGA CGATTCTCTC GTAGCCAGCG TCGTACCTTT TGATGCCGAC
TACAAGGTGG ACAAGGCCGA AGCCCCCGAT TTTGAAAGTA TGCTGCGGAG AGCCGCACTC
GAAACCGTAT CGGATCTGGA GGCGTCAGAA AGCACGGCTG CCCAGCCCCT GCGTCCGAAA
CGAGTCAAGT CAGACGGGTC TTCGGTTCCG CTCAGTCTCG CCACTGGCAG CGATGCGCAC
GTACACAACG ATATGCTGAA AGTAGTCATG GTTGGAGCAC CAGGCGTGGA CAAATCCTAT
GTCGCCCGAG CCATCCGGCA AAGTCATAAA AGGGGACGAA AGCGCGTCAC TTTGGGAGTC
GACGTACACT CCTGGTCGCC CAGGTCGGAC GTAAAGTTTG CAATATGGGA AGTCCAAGGT
GCGACGTCCC GAGACCACGG GGCGCCTAAT TTCGGTGCGC ACGCCGCAAC TCAGGCACTT
TTCTTTTCTT CCTCGTGCCT GTATTTGTTG GTGTGGGATT TGGCTTGTCA AAACGTGGCT
ACGAATCGTT GTCCCAGTCG TCGGCATGAC GGCGAAGATT GCTTCGACAG TTCCGAGGAC
GAAGAAGAAT ACGAAGACGA TTTCTTGCGG GAAGAAGCCA ACCGTCAGGC TGATCGGGCC
TTGTACGCAG ACATACAAAC ACGCCTTCTA TCTTGGGTGG ATACGATTGC CTTGCGCGGA
CCTGGGTCCG CCATTTTGCC GGTAGCTCTT ATCCCTTCCC ACATGAACGA AATAGAGGTC
AAGCGACGAT GTGATACAAT GCAGAATCTT CTCGAGAACC ACCTCCATCG TTTTGATGGG
AGCGAATATT CTCCGAAACT GTTGCTGGGC CAAGATACGA TTCTTTGTGT CGACGAGGTG
ACCGGGTCAG GGATCGAACA GCTGCAGGAA ACAATGGTGG CCATAGCCAC AGATTCATCG
CGATCTGTAT TTGAACACAT GGGTGCACCA GTACCGACGG GGACAGGCAG GGTACTGGAT
ACGGTCCGGC GACTCAAACA AGATCACAAG CTTATCTTGC TAGATCATTT ATTGGGTGAG
CTCGGTCCGG GCTTGGATAT GGCTACAGTA GTCCAAGCTT TGCACTTTTT ATCGAGCATT
GGCGAAATTC TATACTTTGG AACGTCAGAT GATGAAGTTC TATCGCGATA CATTATCCTT
AGTCGAAAGT GGCTTGTGTC AGCCTTGTCA TGCATTCTCC GCAATGACCT TAAGCGTGAG
TTGACCGAAA CTAGAAGATT CATGAATATG CAATGTATTT ACAGCGACCA GAAATTTCCC
GAGAGCGAAA TTACAAAAGT GCTCGTCAGT AGCACGGCGA GCTGTCCATT GCTCAGCGAT
AGCGATGCGC GCATGCTTTG GCAGTCCATG AGTTTCATGC GCGAAGCATC GGATCGGTAT
GCCGAGCTGA CGGAAAGTGC CACCACGGCG CCGACCATGT TTTACTTTTT GGAACGACTA
TTGGTCCACT CCGGTGTTCT ACTGCCCCTA CGAGCTTCGC CACCACCGAC AATGGCCTTG
GACCAACCGG TGCAGTCTGA AGTGTTTTTT ATACCTAGTC TCTTGACGCA AACGGATCCT
CGGGATGTTT GGACGTTCAA ATCCAGTGAA AGTTGGATGA CCACCTTGTG TTACTCCTGG
TTGTTCCGCG ATGGTGCCCC ATCGGATCTC ATGGAGCATG TGTCCGTCGA ATTGCTGAAG
GACCTGTATG AATTTTCTCA AGACTTCCAA GGAACTCCCA AACAGGAGTA TCCTCAGCGG
TCGCACACGG TACCAATAGG ACGGGGGTCC TTGCACCAGT TTCTGGAAGA GCATGATACA
CAAGCGATCG GTCGCATCAA GGTGCATCAA ATCATGTGTT GGAAGACTTC AGTTCTTGTA
AAGATCGGGA CTGTATTTGC CGATCAGGAC AGTGGGGAGC TACGGGAAAG TTTTGTGGAA
GTTTTCGTGA CGGTTGTTGA TCAGAGCTCA AGTCAATGTG TCGCGTCAGA TGCGATGCGC
GCCAGTATGC ATCGGGTTAT AGTCAGTGGG AAAGGTCAGG TAGGCCACCA TGGACGCAAG
TTGTGGAAGG GTGGCTTTGA GGTTGTATTG GACTCGGTTC GGTCATCGCT CTCTACGTAC
CCCAACGTGG ATTCGCAAGT GGTATGTCCA GAATGTCTCG CCCACTCAAG TCCAAGTAAT
GCTTGTACAT GGGGGTGGGA TAGTGTCGTT GCTGCCGTTG AGCGCAAAGA CGCAGTTGTT
CGATGCATGC GTGGACATCG TGTCGACAGC AGCCTAATTT CTGGCAACGC CAAAGATGCC
GAAGTAAAAA CGCCAGCCGT GGAATCGTCT CATTCTCAAC GAGTGTCCAA GCCTGTTCCC
GAGATGCTGC CCAGCGTTGT ACTGGTGGGT CTATGGGATG CGCAGCAAAA GGAGATTCGA
AACGTTGGAT CTGGATTCAT CGTCGACAAA CGTCTTGGGT TGGTAGTAAC AGCTGCTCAT
GTTCTCTACG ACATGGAAGA GGGGCCCAGG TTTGGGGTTC CTTTCTTCGG TTTACCCGAC
GCCAAGGTTG TGATTGGAAT CATTCCCGAT GAAGGGCACA ACGCAGTCTT CCGCTACTTT
GGTGAGATCG TGCTGAGCGA CGTCCACAAC GTAGACGCAT GCGTTGTGCG TGTTACGAGC
AAAATGGCTG AAGACGTTGA CGATGAAGGC ACGGGCTGTG TGAATCAAAC CGAGATTTCT
TTAGACTACG AGGCTGTGGA GTCCGAAAAA CTCCGTTCGT TGAAAATGAC GAACCGATTC
GAGCTAGAGG AGTCTGTCCG CATCCTCGGG TTCAACCAAG GAGGTGAAGG TGTCTTTGAG
CTGGGCAAAC ACGTAAACCG GTCCGCTGAC TTTGCCAAGG GCTATATCTG CAAAAAGTTC
AAAGCTGCGA TTTCCGACGA CGGATCGCAC TCATCCAATT CGTCGGGCAA GACGTTTTCG
CCACGCGAAG AAATCGTGAT CATGTGCCCG ACAATTTCGG GACACAGTGG TGGTCCGTGT
GTGAACGACG AAGGTCGCGT GGTTGGTATT TTGAGTCGAG CCGATCCCGT CGATCGGCAA
CGTTGCTATC TAGTCCCGGC GACCGAATTG AAGCGGCTGG TAACCAAGGC CAAGAAAACG
TGTGTGAGGC CTGCCAAGCT AGCGACTGCT ATTACTATGT AATTTCGATC CGGGGCAATA
ATATAAGTTT CCCTCCCTTT AC
|
|---|
| Protein sequence | MSTNEPLRPG SGSSSNGGRS RCGSDSNSHS TNQNTEGSVT QAPVLAPEEG PPVLLREWNP
APPPPSTPVA PAVIWPDRSP EAEDRRPAYS YPVATFVRDL VRTGMDQIES AWQQQESSST
AQRDGTGTRP HGTHNRVEDD DSDAYRPLSV RSESDALAMR SEAAAAFMES TATVSARTIN
DLDDEHEDAE FILVDGELVL MPPPPPNAAE QDGLVRHLQN QEFERHFSLR ARYHPDHPAV
KSCQPNRVRR GVRKLGKIFK RKNGLRRASS KESAQSHVHH VDDSSAHTSH DGSSLPSLSA
DFLTAPSGAD SITTLNHTTN NGGINSNNNP KSPPRKKDKR RGKRRSWRRT DSSGGENDDF
DDETSPDIFE SRSGEFSSRT GPRPATFTTI SALANRSAAS IRPPMPPMTP IQETLDASNM
FSGGRAASVE ARFVGTTADV LEAGVLPTGF AAEAYVEYDS DEALKKDDSL VASVVPFDAD
YKVDKAEAPD FESMLRRAAL ETVSDLEASE STAAQPLRPK RVKSDGSSVP LSLATGSDAH
VHNDMLKVVM VGAPGVDKSY VARAIRQSHK RGRKRVTLGV DVHSWSPRSD VKFAIWEVQG
ATSRDHGAPN FGAHAATQAL FFSSSCLYLL VWDLACQNVA TNRCPSRRHD GEDCFDSSED
EEEYEDDFLR EEANRQADRA LYADIQTRLL SWVDTIALRG PGSAILPVAL IPSHMNEIEV
KRRCDTMQNL LENHLHRFDG SEYSPKLLLG QDTILCVDEV TGSGIEQLQE TMVAIATDSS
RSVFEHMGAP VPTGTGRVLD TVRRLKQDHK LILLDHLLGE LGPGLDMATV VQALHFLSSI
GEILYFGTSD DEVLSRYIIL SRKWLVSALS CILRNDLKRE LTETRRFMNM QCIYSDQKFP
ESEITKVLVS STASCPLLSD SDARMLWQSM SFMREASDRY AELTESATTA PTMFYFLERL
LVHSGVLLPL RASPPPTMAL DQPVQSEVFF IPSLLTQTDP RDVWTFKSSE SWMTTLCYSW
LFRDGAPSDL MEHVSVELLK DLYEFSQDFQ GTPKQEYPQR SHTVPIGRGS LHQFLEEHDT
QAIGRIKVHQ IMCWKTSVLV KIGTVFADQD SGELRESFVE VFVTVVDQSS SQCVASDAMR
ASMHRVIVSG KGQVGHHGRK LWKGGFEVVL DSVRSSLSTY PNVDSQVVCP ECLAHSSPSN
ACTWGWDSVV AAVERKDAVV RCMRGHRVDS SLISGNAKDA EVKTPAVESS HSQRVSKPVP
EMLPSVVLVG LWDAQQKEIR NVGSGFIVDK RLGLVVTAAH VLYDMEEGPR FGVPFFGLPD
AKVVIGIIPD EGHNAVFRYF GEIVLSDVHN VDACVVRVTS KMAEDVDDEG TGCVNQTEIS
LDYEAVESEK LRSLKMTNRF ELEESVRILG FNQGGEGVFE LGKHVNRSAD FAKGYICKKF
KAAISDDGSH SSNSSGKTFS PREEIVIMCP TISGHSGGPC VNDEGRVVGI LSRADPVDRQ
RCYLVPATEL KRLVTKAKKT CVRPAKLATA ITM
|
|---|
| |