Gene PHATRDRAFT_44517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_44517 
Symbol 
ID7197779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp787226 
End bp788462 
Gene Length1237 bp 
Protein Length349 aa 
Translation table 
GC content44% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178577 
Protein GI219115563 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.144831 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAT GCCTAGAAAA CACTGAAACT TGCATTCAGA ATAATCACAC CTATGATCAG 
TATGAATTTT CGATCGAGAG CTCGTCAGCT CCAGAATGTT TTCCGATGAA GGAGGAAGAT
ATTGACTTCA CTCTTGTCAC CCAGCTCTCT TTCAACAGAC TCTCGATGAT GAGACAGCAT
TGCGAGCGCT GGGGGGATCA TCCCATTTCT CTTGCAATTG GTACGACAAA AAATCTCGAG
ACTGTACAAA AAGCCTTGTC CCAGTTGGGG TGTAAAAATG AAATGATCAC AGTGAGCCTT
ATTAGCGACT TCAATTCGGA AGAAGAGTAC CCTGTGAATC GACTTCGCAA CCTTGCCATG
TCTCACATCA AAACAAGCCA CGCTGTCATC ATTGACGCTG ATTTTGTTCT CTCAGTGGGT
CTCTTTGAAA TTCTCCATAT GCATCGTGCA ACTCTTGCTG CTGACTACTT GAATGCGTTG
GTGATTCCTG CTTTTGAGCT TCGAAAAGTA TGTGAAGAGC AAACCCTTAA TTGCACAGCT
CTTCATATAG CTATGCTTCC TCACAACAAG GACGAGCTCC TAAAACTGTA TAGAGGGGCA
ACAGAGGTGT ACAGCAACTC ATCCAGTGTT ACACAATTCA ACGGAAGGGG CAACTTTCAT
GGTCATGCTA GTACGCGTTA CACCGACTGG ATTACTCAGC CGGCGGAACA GCTTCTACCT
ATTGAGTGTG TGACTTCCGA TCGCTATGAG CCGTACCTTG TAGTCCGTCA TTGTCGAGCT
CTTCCACCCT TTCAAAAGGT TTTTGTTGGC TATGGCCAGA ATAAAATCAC GTGGTTGCAG
CAAGTTCGAA GAGCGGGGTA CAAGTTCTTT CAGACAGGAG AAGGATTTGT CATTCATTTG
CCACACAGAA AGTCGGTTTC ATCTGTCAAG TGGAAAAAAG CTCGTCTCAA GGACCGGGGA
TCCGTTGAGG TCGAGAAAGT TGCAGAAGCC TTTCGTGCAT GGATGACCGA GTATATTCCG
GACAACTCTC AAATACCGTA CTGTTCCTGA GTATGAATGT ACGCGACGCA GCCTGTATAT
CTGCTCGTGT TTTTCTGTTG GTTGTGGACT TTTCTAGTGA TTACTTATAT TTGCAAAATA
CTGTCACGAG TGTTGGAAAT GAAGCTTGTT TATTTTCTAA CTTTTTGACT GGGAATACGA
GTACCTTACT TTTGCATCAA TGCCATAGCG TTAACAG
 
Protein sequence
MEKCLENTET CIQNNHTYDQ YEFSIESSSA PECFPMKEED IDFTLVTQLS FNRLSMMRQH 
CERWGDHPIS LAIGTTKNLE TVQKALSQLG CKNEMITVSL ISDFNSEEEY PVNRLRNLAM
SHIKTSHAVI IDADFVLSVG LFEILHMHRA TLAADYLNAL VIPAFELRKV CEEQTLNCTA
LHIAMLPHNK DELLKLYRGA TEVYSNSSSV TQFNGRGNFH GHASTRYTDW ITQPAEQLLP
IECVTSDRYE PYLVVRHCRA LPPFQKVFVG YGQNKITWLQ QVRRAGYKFF QTGEGFVIHL
PHRKSVSSVK WKKARLKDRG SVEVEKVAEA FRAWMTEYIP DNSQIPYCS