Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_44517 |
Symbol | |
ID | 7197779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011672 |
Strand | - |
Start bp | 787226 |
End bp | 788462 |
Gene Length | 1237 bp |
Protein Length | 349 aa |
Translation table | |
GC content | 44% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178577 |
Protein GI | 219115563 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.144831 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAAT GCCTAGAAAA CACTGAAACT TGCATTCAGA ATAATCACAC CTATGATCAG TATGAATTTT CGATCGAGAG CTCGTCAGCT CCAGAATGTT TTCCGATGAA GGAGGAAGAT ATTGACTTCA CTCTTGTCAC CCAGCTCTCT TTCAACAGAC TCTCGATGAT GAGACAGCAT TGCGAGCGCT GGGGGGATCA TCCCATTTCT CTTGCAATTG GTACGACAAA AAATCTCGAG ACTGTACAAA AAGCCTTGTC CCAGTTGGGG TGTAAAAATG AAATGATCAC AGTGAGCCTT ATTAGCGACT TCAATTCGGA AGAAGAGTAC CCTGTGAATC GACTTCGCAA CCTTGCCATG TCTCACATCA AAACAAGCCA CGCTGTCATC ATTGACGCTG ATTTTGTTCT CTCAGTGGGT CTCTTTGAAA TTCTCCATAT GCATCGTGCA ACTCTTGCTG CTGACTACTT GAATGCGTTG GTGATTCCTG CTTTTGAGCT TCGAAAAGTA TGTGAAGAGC AAACCCTTAA TTGCACAGCT CTTCATATAG CTATGCTTCC TCACAACAAG GACGAGCTCC TAAAACTGTA TAGAGGGGCA ACAGAGGTGT ACAGCAACTC ATCCAGTGTT ACACAATTCA ACGGAAGGGG CAACTTTCAT GGTCATGCTA GTACGCGTTA CACCGACTGG ATTACTCAGC CGGCGGAACA GCTTCTACCT ATTGAGTGTG TGACTTCCGA TCGCTATGAG CCGTACCTTG TAGTCCGTCA TTGTCGAGCT CTTCCACCCT TTCAAAAGGT TTTTGTTGGC TATGGCCAGA ATAAAATCAC GTGGTTGCAG CAAGTTCGAA GAGCGGGGTA CAAGTTCTTT CAGACAGGAG AAGGATTTGT CATTCATTTG CCACACAGAA AGTCGGTTTC ATCTGTCAAG TGGAAAAAAG CTCGTCTCAA GGACCGGGGA TCCGTTGAGG TCGAGAAAGT TGCAGAAGCC TTTCGTGCAT GGATGACCGA GTATATTCCG GACAACTCTC AAATACCGTA CTGTTCCTGA GTATGAATGT ACGCGACGCA GCCTGTATAT CTGCTCGTGT TTTTCTGTTG GTTGTGGACT TTTCTAGTGA TTACTTATAT TTGCAAAATA CTGTCACGAG TGTTGGAAAT GAAGCTTGTT TATTTTCTAA CTTTTTGACT GGGAATACGA GTACCTTACT TTTGCATCAA TGCCATAGCG TTAACAG
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Protein sequence | MEKCLENTET CIQNNHTYDQ YEFSIESSSA PECFPMKEED IDFTLVTQLS FNRLSMMRQH CERWGDHPIS LAIGTTKNLE TVQKALSQLG CKNEMITVSL ISDFNSEEEY PVNRLRNLAM SHIKTSHAVI IDADFVLSVG LFEILHMHRA TLAADYLNAL VIPAFELRKV CEEQTLNCTA LHIAMLPHNK DELLKLYRGA TEVYSNSSSV TQFNGRGNFH GHASTRYTDW ITQPAEQLLP IECVTSDRYE PYLVVRHCRA LPPFQKVFVG YGQNKITWLQ QVRRAGYKFF QTGEGFVIHL PHRKSVSSVK WKKARLKDRG SVEVEKVAEA FRAWMTEYIP DNSQIPYCS
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