Gene PHATRDRAFT_44515 details

Gene Information

• Locus tag: PHATRDRAFT_44515
• ID: 7197732
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011672
• Strand: -
• Start bp: 783688
• End bp: 785906
• Gene Length: 2219 bp
• Protein Length: 610 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002178575
• Protein GI: 219115559

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCATGC TACTGAAGCC CAATTGTGAG GACGTTGAAC AAGACCATAG CGACACGAAA 
GCCTGCAGTA TCACCCCTTT CTTTCTTGGT ATGTACTTTT CTGCACCGAC ATTTCATAAT 
TTTGTGAGGC TACATATGTA GAACAGCTTA CAGTTAGATA TTTCGTGTTT CAGCTTGTCT 
ACAGTGGTCT TCGCGACTTG TACTCTTTCG GCGTATAGAG GCCGACCAAA CCTCTTGTCA 
TTTGTGACTT TCCCTACAAC CACTATCCGA AAAGCACAAC AAACCCAAAC GAGTATCCCA 
TCCCATTCGG TGAGCCAGTC AAACACTGGC TATAGCCAAC TGATTGACTA GAACAATTAG 
AAGTGGATGT AATTGTACGC GATCAAAAAT ATAGGGGTGG AATAATGAAA TTTTTTTATG 
ACACGGTCTG ACGGTCATAC GCTAGACGTA CGAATACAGA CGCTACACGT GGGGTTTTTA 
CAACGAGGCA TGGGAAGATG CAGCGCAGCG GCTTGTCGTG ACAATACGGA CGAAATTTGT 
CTCTGGCCAA AAGAGAAACA TCAACAACCA CCGTATAGAC GAGCTTGATT GTGACTCACA 
GTCAGATTGA AGCTGCTCTA CAAGGCTACG CTCTCCCGAT TCTCGTGCTC CGGCCGAACA 
GGGTCCGTTA CGGGAATATT GCCATGAGTC ACCCACAGTC CCGCCTTCCC GAAATTCTGA 
ACGGGTTTTA CAATCGAATC ACCCGTCTTG ATGATTTCGA ACGCAGGTTG GATGAGCGCG 
CGGCTCGACT TCGTCGAAGA ATTGCCAACG TTCTCGATCA TGTTCCCGTG CATCGTCACT 
CCCATCTGCG AGTCTTTATT ACGCATGATG CGCTCCCCGT AAAACCGGAA CCAGACACAC 
CTAATCCAGA CCCCCCGACG ATTGATTGGA CGTTGCAAAT TGAAGGAAAG CTACTAGTTG 
GCCATTTGGA CTACGCCAGC GCAGCAGCAC ACGACGCCAG AGTGGGCTTT GTTCCACCAA 
CCGACGATCT CGATAGGTCC AAGGCAGAAA AAGAAGAAGA AGAATTGTCT CCCGTCGATT 
TCACCCACTT GTTTGAGAAA GCAAACGTTG AGTTTCAAAC AGTGTATATG CCTCGACCGA 
ACCCAATGGC GGCTGCCAAG CCAAAAACAC CCACTAAGAA ATCTTCCCGA CGCGCCACCA 
AATCTCCTTC CGCCACTTTT GAAGAGAAGG AAGTGGATCC ACGAACCTTA TCAGTATCTC 
AGACAGCCGA GTTTTGCTGG GAGCGAACCA TGTCCGCAGA TGCGCTAGCG TTTCACGTGA 
GGTATACCTC GCCTCCCCCA CCTGCACATA GCCAGCAAAT CCACGCGGCG ATAGCCCATA 
TTCAGCTATA CCCAAACGTC GAAGGTCAGG AGACTACGTA CCAGGTATCC AAGGAGCTTG 
CTGAAGCATT GTTTCCGAGT CATGGACCTG GCGTAGTCGG CAGCACGATA GGAACAAAGC 
GCAAGATCGA TGAAGTCGCA ATCGAAATTC CTTGTCTGGA AAACGAAATT GAAATTCCTT 
CCGGGTTGAC TATGTCGGAA TTGATTCAAG GTTTTTTTAC GTACGTTCAG GATCGAAATC 
TGTGCGACGA CTCAGACATG AGTACCATTG TTTGCGACGA GGCACTGCAG CAACTCTTTG 
AGGTCGACCG TATTCCTTTC TCGCAGATCC AAGTAATGCT TGTAACGAAA AATTTGATCA 
GAAATGTCAG CAATGAGCCC GTACGATTGA AGTACATTCT CAGACCAGAC CAATTTGTTG 
CGCCGTCGCA CATATCTTTG GATAGTCACT TGCCGGCACA GCTTCAACTT GACATGGATG 
TAAACTTGCC AGCTTTCTTT CCCTATCGTG CCCGGGAGCT AAAGCGACGA ATCAAGAGAC 
GAGAACTAGA ATACACGAGC TCACGTACCA AGGCGCGATA CATTCTAATG GCACGACGCT 
CGAAAAACGA GGAAACCGTG AAACAGCAAA TTGAGCAAGC TGTGACAGGA CATATTGTTG 
GACGTGACAT GATCCCTATA CTTGCCGCAT TGGCGAAAGC GGCCCCTCCC CACACTGAAG 
CACGGCTGGC ATCGCATCTA GATGCGAAGA TAAGTTTTAT GTTTGGCCAA GCGGAAGAGC 
ATCAAAAAGC AGCGCAAGAC GCTTGGAATA GGCTTAGCAT ACTGGAAGGA ACCAGTTGA 

 

Protein sequence

MAMLLKPNCE DVEQDHSDTK ACSITPFFLD VRIQTLHVGF LQRGMGRCSA AACRDNTDEI 
CLWPKEKHQQ PPQIEAALQG YALPILVLRP NRVRYGNIAM SHPQSRLPEI LNGFYNRITR 
LDDFERRLDE RAARLRRRIA NVLDHVPVHR HSHLRVFITH DALPVKPEPD TPNPDPPTID 
WTLQIEGKLL VGHLDYASAA AHDARVGFVP PTDDLDRSKA EKEEEELSPV DFTHLFEKAN 
VEFQTVYMPR PNPMAAAKPK TPTKKSSRRA TKSPSATFEE KEVDPRTLSV SQTAEFCWER 
TMSADALAFH VRYTSPPPPA HSQQIHAAIA HIQLYPNVEG QETTYQVSKE LAEALFPSHG 
PGVVGSTIGT KRKIDEVAIE IPCLENEIEI PSGLTMSELI QGFFTYVQDR NLCDDSDMST 
IVCDEALQQL FEVDRIPFSQ IQVMLVTKNL IRNVSNEPVR LKYILRPDQF VAPSHISLDS 
HLPAQLQLDM DVNLPAFFPY RARELKRRIK RRELEYTSSR TKARYILMAR RSKNEETVKQ 
QIEQAVTGHI VGRDMIPILA ALAKAAPPHT EARLASHLDA KISFMFGQAE EHQKAAQDAW 
NRLSILEGTS