Gene PHATRDRAFT_44481 details

Gene Information

• Locus tag: PHATRDRAFT_44481
• ID: 7197759
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011672
• Strand: +
• Start bp: 697894
• End bp: 699957
• Gene Length: 2064 bp
• Protein Length: 583 aa
• GC content: 47%
• Product: predicted protein
• Protein accession: XP_002178284
• Protein GI: 219114977

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00684975
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CATTAGTATT GTTCAGCTTC CGTGAGATAG GACAAAACGC TTACTCTAAT CCACGGTTCT 
TTTGATCTTG TAGGGACCAA AACCAAAGAT GCTAACAAAC GCAGTGTATG GTTCCGAAAA 
CGACGACGAA GCGGGAGAAA GTGGATCCTC GGCTCGACAG GGCGAACAAA GCCAGAGAGA 
CTCAAGCGGA CCCCATGATG AGAGCCACAT CGAACACAAG GATGAGGGCA TGGCCTTCTT 
TCGACCTATC ATTCAGCGTC AACGATGGGG CGATGATCAA TTGCCGGCCC ACACTGACTG 
GGGGAATATT TTCTTTGACT TGTTTTATGT AGCAGCGTAA GTGAAGATCG AGCGGGTCAC 
AATATCTGGT GGCATCATGC ACATTTCCTC AGCCCAGCAA TCTACCTCTG GATTATCAGT 
GCTTACAACC TAGGAAGCTT ACTGCGAGAG GATCCATCAA GAAGAGGGCT CCTTTACTTG 
ACCGGCTGTT TTTTGCCGAT TTTGAATCTC TGGAATTACA AAATGGGCTT CTTGGCCCGC 
TTCCGGATCC CTCACGATGT CTACCACCGT GTATTCGAGG TGATGTATCT CATCCCATTA 
GCGACAGCCG TTACACACAT TCATCACGTA CCAATTCTTT CGGATCCGGA GCGCCATCTC 
GATATGTTCG TGTTTTGCTG TAGTATCACG CTCGCCGGTG CAATGTACTT GATCGTTTTG 
GTCGAAGTAA TGATTTCGCA ACGAATGGGA GCAAAGGAAC TCTACCCCGA ATCCTGGTAC 
ATGGCCCAGA AATTGATTTG GATTTCAGCC GTTCCCACAC TACTGGCTTT GTGTGCGACG 
GTGTATACTG GCAAGATGTA CTTTGATAGT TCAAAGAAGC ACGCAGTCTA TAACGCCTCG 
TCGGGGACCG GCGACTTCAA TGGTACCTCC AACGTAACTG GTGACGTTCC TCATCTGCGC 
GATTTGGCAT CGTCGGAAAG TCACGAATAC AATGGGGGAG CCGAAGACGA CGTCGCCATC 
TGGCTTCTCA TTGGGAGCAG CTTTGCAAAT ATTGCAACCA TGGGGTTTAT ATTCCTTGGC 
AATCGTTGGT GGAAGCCTAG CGTGCCAACT ACAGATTCTC AAAAGTACGA TACTTTAAAT 
AAAAGTGTAC AGGAATATAC AGTGATTTGG TGACCTCACG TCTTTCTTTT ACTTTTAGGT 
ACACTGTCCC TATGAATATC GAATTTTCCA TTCATCGGTA TGTTTTTTGT CCGACTTTCA 
CGCTGGCTCT TCTCTTTCTC ACTTTATACT TTCTTTAAAA TTAGATACGG CGAGTGGACA 
ATGTTGCTTC TAGGCGAAAG CATTCTGTCG CTATTGATAG TGGATCTTAG TGAAGGGGTT 
CAGTACTACG AGATATTCTT TTGCGGCGTG ATCACTGTTG TCTTTCTCGA GTATTTACAT 
TTTCGGTCGC AGCCATCAGA AGCAAATGAC CATGCGCTCA GGCGAAGCGC TAGTAGTGCA 
ATGGTCTTTT TCATGTTTAT GCAGGTATAT TCTATTGCAC TCGTAGTTCT TGGTACTTCG 
TATAAAATGT TCCTCTATGA ATCCGTTTAC GCCGACGAAA GTGCTGGGAC CAAAAGCCGG 
GCACTTTTGC CCATGTTCGA ACGTTTCCTT GCAGGAAAAT CGACGGCTTC CCGTTTCGAA 
ACTGGTGATC GGCAGCAGAG GATTGCTCAT TTCTTCAGTG GGAGTCTCGC GTTGGTTTGG 
ATATGTTTGG ATGCTATGAG TATTGCGCAC CGTGGCGTAA AATCAAATCT ACATCGACTT 
GAAGGCAAGA GGGGAAAGAA AATCGCACGT TTTTTGTTGT TGCTGCGTAC GGTATTGATT 
GTGTTCATCG GGACGCTAAG TCTTTATGTC ACGTCCCCTG TTTACCTCGC ATTTACTGGC 
CTTGGTGGCG TTGTCGCTCA GATTCTACTC CGCTTCTTGG GTTCGGCTAT TTTTTCTGTA 
GACGATGAAT TTCATGAGGA AGAGACCATC GAAAAAATTG CGACCTATGC CAACGCCAGG 
TTGACTGAAT CAGGCAGGGA ATAA 

 

Protein sequence

MLTNAVYGSE NDDEAGESGS SARQGEQSQR DSSGPHDESH IEHKDEGMAF FRPIIQRQRW 
GDDQLPAHTD WGNIFFDLFY VAAAYNLGSL LREDPSRRGL LYLTGCFLPI LNLWNYKMGF 
LARFRIPHDV YHRVFEVMYL IPLATAVTHI HHVPILSDPE RHLDMFVFCC SITLAGAMYL 
IVLVEVMISQ RMGAKELYPE SWYMAQKLIW ISAVPTLLAL CATVYTGKMY FDSSKKHAVY 
NASSGTGDFN GTSNVTGDVP HLRDLASSES HEYNGGAEDD VAIWLLIGSS FANIATMGFI 
FLGNRWWKPS VPTTDSQKYT VPMNIEFSIH RYGEWTMLLL GESILSLLIV DLSEGVQYYE 
IFFCGVITVV FLEYLHFRSQ PSEANDHALR RSASSAMVFF MFMQVYSIAL VVLGTSYKMF 
LYESVYADES AGTKSRALLP MFERFLAGKS TASRFETGDR QQRIAHFFSG SLALVWICLD 
AMSIAHRGVK SNLHRLEGKR GKKIARFLLL LRTVLIVFIG TLSLYVTSPV YLAFTGLGGV 
VAQILLRFLG SAIFSVDDEF HEEETIEKIA TYANARLTES GRE