| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_44480 |
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| Symbol | |
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| ID | 7197711 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011672 |
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| Strand | + |
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| Start bp | 695146 |
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| End bp | 696742 |
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| Gene Length | 1597 bp |
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| Protein Length | 497 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002178283 |
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| Protein GI | 219114975 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000641793 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CATGGCGACA CCATCGTACA ACGTGAGCTT GGATCTTCTT TCGTCCGCTT CTCACCAGGA
GATCCATTCC CACCAGCAAT CCGATGCCCC CTATGTAGCC ATGGAAATGG CAGGACCTCG
ACCAAAGAGC AACCAAAATG AAAAAATTTT CAGTGATGTT CCGCCAGTGA TCGACAAAGA
TGAGACAGAC GATGGCGACT CCGTTGCCGT CTCGATTGTC AGTTCCGTCA TGACAGCAGA
AGGAATACAC GACTGGACAG GATTCTGTTG CGTATGCCTG GTTGTTCTTA TTGGTGACAT
GAGCCGAGGT GTTATGTTTC CTTCAATGTG GCCCTTGGTG GAAAGTCTAG GCGGAAGCCA
AATCACGTTG GGCTATGCAG TCGCCGCCTT CTCGTTCGGT CGCGTCCTTG TGAATCCAGT
TTTCGGATCC TGGTCACATC AGATTGGCTA TACAAAAACG TTGCTGATGA GCTGTTCGAT
TCTGTTCGTA GGGACGCTCT GCTACGCTCA AACACAAAAT GTAGGTCGAC CGGAATTTCT
GATCGTTTCG CAGACGATTC TAGGAGTCGG AAGTGGTACG CTTGGTGTAA CACGCGCATT
TGTGGCCGAT GTGACGGCAA AAAGGCAGAG GACCACATAT ATGGCATGGA TTACCGCTGT
GCAGTATGCT GGCTTTACGG TCACTCCCTT TTTTGGGGCC TTGTTCAACT TTGCCTTTCA
AAACAACGAT TACCAGTACG GCATTTTCCG TTTGAACATG TTTACAGCCC CTGCGTACTT
CATGGCCTGT TTTGTGGTAG GGACATTTTT TGTGCTGATA TTCTTTTTTC AAGATCGGCA
CCGCATATGC ATAAGAAAAG AAGCGAAAAA GTCGAAGAAG CGAGCTGCGA TGGAAGATAT
TGCCAACGCT GTTACATGGA TCGGTATATC TGTGTACGAC TGTTGTATTC TGGGTTGTAT
GTTACTGAAT GTGTCGACAA AAGGATCGAT ATCTTCTTTC GAAACTTTAG GAATTTCGAT
TGCGCAGTCA CACTTTGACA TGGTGGCATC GCGAGCTGGA ATGATCGTCG CTACTTGCGG
AACCATGGGT GTGTGTGCTT TACTTTCAAT GGGGACGTTG TCGAACCACT TCAACGATGT
TCAGTTGATT TCCGGAGGTA TGACAATAAT GGCAATAGGT ATTGCTTCAT TGACTACCAT
TGAAGAAGGG ATTCGAAACC CTTCTTGGAG GTACTTCGTT GCTATGTTTT TGATTTATTC
AATTGGTTTT CCTATTGGCC ATACAGCAGT TATTGGACTC TTTTCTAAAG GTACGTGCTG
CATTTTTCCT CGCGAACGCT GGAATTGCAG CCAAGAACTT ATCACCACTT TTGTTTGGAT
CATCTTTGCA GTTGTTGGAC GTAGGCCGCA AGGCGCATTG CTTGGATGGT TCGCTTCGGC
CGGATCTTTA GCGCGTATGT TCTTTCCAAT TATGTCGGGG TATGTTGCCG ATTACAAAGA
TGTGGAAACT CTGTTTTGCA TACTGACGGG GGTATTATTT GTCTCGATTG CTTTTGTGTA
CTGGTCCCGG GATATTCTCT TATTTTTGTC GTCCTAG
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| Protein sequence | MATPSYNVSL DLLSSASHQE IHSHQQSDAP YVAMEMAGPR PKSNQNEKIF SDVPPVIDKD
ETDDGDSVAV SIVSSVMTAE GIHDWTGFCC VCLVVLIGDM SRGVMFPSMW PLVESLGGSQ
ITLGYAVAAF SFGRVLVNPV FGSWSHQIGY TKTLLMSCSI LFVGTLCYAQ TQNVGRPEFL
IVSQTILGVG SGTLGVTRAF VADVTAKRQR TTYMAWITAV QYAGFTVTPF FGALFNFAFQ
NNDYQYGIFR LNMFTAPAYF MACFVVGTFF VLIFFFQDRH RICIRKEAKK SKKRAAMEDI
ANAVTWIGIS VYDCCILGCM LLNVSTKGSI SSFETLGISI AQSHFDMVAS RAGMIVATCG
TMGVCALLSM GTLSNHFNDV QLISGGIASL TTIEEGIRNP SWRYFVAMFL IYSIGFPIGH
TAVIGLFSKV VGRRPQGALL GWFASAGSLA RMFFPIMSGY VADYKDVETL FCILTGVLFV
SIAFVYWSRD ILLFLSS
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