Gene PHATRDRAFT_44474 details

Gene Information

• Locus tag: PHATRDRAFT_44474
• Symbol: ATPase1-2B
• ID: 7197757
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011672
• Strand: +
• Start bp: 678687
• End bp: 682138
• Gene Length: 3452 bp
• Protein Length: 1089 aa
• GC content: 52%
• Product: P2B, P type ATPase
• Protein accession: XP_002178277
• Protein GI: 219114963

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGTCGA AAACAGCGAG TCATAGTTCC ACCGCGAATC CACACGGCAA GTCACGGGTC 
GCCGAGACGA TCCGCATGTT GGAAGCCGAA TCTTCCGATC TACGGGGTTT ACTGCAGTCT 
ATTAACGAAG CTCAATCCTT GGAATCGAAC CGTCACAACC TCGAGACTGT CCTCGAAGGC 
CCTCAGGGTC TGGCACGTCG CTTGGGAACG GACCCCAAAG CCGGTCTCGA CCGAGAAACC 
ATCGAAACCC GCCGAGCCTG TTTCGGAGCG AATCGCCTGC CCTCCGCCCC ACGCAAGACC 
TTTGGACAGC TCTTTCTCGA CACCTTCGAC GACGCTACGC TGCAGATTCT TATCGTGGCC 
GCACTCGTGT CGCTCGCCGT TGGCTTGTAC GACGACCCCG CCACGGGCTA CGTCGAAGGC 
TGCGCCATTC TCGCCGCCGT CCTCGTCGTA TCCTTCGTGA CGGCCGTCAA CGACTTTCAA 
AAGGAATCGC AGTTTCGCGA ATTGTCCGCC GCCAACGATG CGGTAGACGT TCTTGTAGTC 
CGGAACAACG TACACTGGCA AATACCGGTG GATGAATTAG TCGTGGGGGA CGTTGTCTGC 
GTCGAAGCCG GCGACCAAAT ACCCTGCGAC GGAGTTCTCC TTGTCGCCGA TGATGTCCAA 
GTGGACGAAT CTGCCTTGAC GGGAGAACCG ACTGACGTGG ATAAAAGTTT ACAAAATGAC 
CCTTTCGTCC TCTCCGGATG CACCATGGAA GCCGGGACGG CCAGATTCCT GGCCATTGCC 
GTCGGCAAAG ACTCGCAGTG GGGTATCATC AAAGCGCATT TAGACAAAGA ACACTCGCAG 
ACGCCGCTAC AGGAGAAGCT GGACGATATG GCGGCCATGA TCGGATACAT TGGTATGGCG 
GCCGCCGCCG CTACTTTTTT AGCCATGATG TTCATCAAGG TCGTTCTCAA ACCGTCCTAC 
CTGGCTCATA TTTCCGTCTT TAATTACGCG CTGGAAGCCT TTATTATCGG CGTTACCATT 
GTGGTAGTGG CCGTCCCGGA AGGTTTGCCT CTGGCGGTGA CCATTTCCCT TGCCTTTTCT 
ACCAAGAAAA TGTTGGCCGA CAAGAACCTC ATTCGTCACT TGTCTGCTTG TGAGACCATG 
GGCAACGCCA CAAACATCTG CTCCGACAAG ACGGGAACCT TGACCGAAAA TCGTATGACG 
GTGGTGAAAG GAATCTTTGC CGACACGAGG TGTGACGACA CCATCAATCG GGTCCCGGTC 
TTGATCAACA AAAAGGCACT CGAGGTTATT TTGGAAGGAA TTGCCTGTTG TTCTACCGCC 
AAAGTGATAC CAGCGCAAGC GGCCGTTGCC AACGAACACG GTATTGACGA TCTGCATCTC 
GTCGACGATC GCCCCCACAT TATTGGCAAC AAGACCGAAG CCGCCTTGCT TATCCTGGCG 
CGTTCATCCT GGACCCCACA CGACGATACC GACCAACGTC GCGTCGACGC CAACTTTGGA 
GCGGAAGGTG GCTCTCGTCT CTTTCCTTTT TCGTCGTCCC GGAAGTGCAT GACGGTGTTC 
GTTACCAAGG ACGAAGCTGC AGTCTCGGAT ACCAGCATTC GTACTCGTCG TGCGACCAAA 
AATGTCCAAT CTTATACATT GTACCATAAA GGAGCGGCCG AAATTGTGTT GGATAAATGC 
ACCAAATACC TGGACATTGA CGGTACCGAA AAGGAAATGT CGGACCAGAA GCGAGAAGAA 
TTTGCCAAGC TCATTCGCGA ATTTGCTTCG CAGGCACTGC GGTGTGTGGC ACTAGCTCAT 
CGTCGGGACA TACAGAACGT GGTCGATCCG CAAACGGTCA CACAACAGGA TTGTGAAAAA 
AAGTTGGAAA AGGAAATGTG CCTCGACGCC ATTGCGGGTA TCATGGACCC CCTGCGGCCG 
GACGTTGTTG AAGCCGTGGC TATTTGTCAA CGTGCGGGCA TCTTTGTTCG TATGGTGACG 
GGGGATAACC TAGACACGGC GGAAGCGATT GCTAGACAAG CTGGTATTCT GACGGAAGGT 
ACGTTGTGTC GGATCGAAGC TTGCACCTAC GTTAAGACCT GTCTTATTTT CGATCAACAT 
GATCGATCTT AGTTGTCTAA CTTCAGTCAA TCTAACCCTT TGACTTACTC TCGTTGCTTC 
CTGCAGGCGG TATTTCCATG ATTGGCGAAA AATTCCGCAA GCTAACGCCC GCCCAACTCG 
ACGAAATTCT TCCTCGTTTG CAAGTGTTGG CCCGCTCAAG TCCGGAAGAC AAGCATACAC 
TCGTCCAACG TTTGAATGGT GCAGCCATCC CGTCGACCGA ATCAGAATGG TGTGAAGCGC 
ACCCGAACAA AGACTTTGCG ACCCAACGTA ATTTGTTACT TCCGGGCTAC AAGGACGAAT 
GGGCCAAGAG CCGATTTGGC GTCGGGGAGG TCGTTGGAGT CACAGGAGAT GGAACGAACG 
ATGCTCCCGC ACTCAAAGCG GCTGATGTCG GTTTGTCCAT GGGATTAAGC GGAACGGATG 
TAGCCAAAAA AGCTTCAGAT ATTATTATTA TGGACGACAA CTTTGCTTCC ATCGTCCGCG 
CCGTACTTTG GGGACGCTCG GTCTTCGACA ACATTCGCAA GTTCCTTCAG TTTCAGTTGA 
CGGTCAACGT TGTTGCCTTG ACAATTACCT TTTTGGCTGC CGTCGTGGGG TACCAACCTC 
CCCTCAACGC GGTCATGATG CTGTGGGTCA ATCTGATCAT GGACACCATG GGTGCACTCG 
CTCTCGGTAC CGAGCCACCT CTCAAGGAGC TTTTGGACCG CCGTCCATAC CGCCGCGATT 
CCAGCTTAAT TAGCCGTCCA ATGTGGCGCA ACATTTTGTG CCAAGCCGTC TTTCAGCTTT 
CACTCCTGGT CTTTTTGCTA AACAAGGGGC CCGCCATGTT TGAATGCGAA GACGGTTCCA 
GACATCACTT TACTATTCTT TTCAACGCTT TTGTGTTTTG CCAGGTGTTC AACGAGTTCA 
ATGCACGTGA AATTGGAGAT CGCTTTGATC CACTTCGTTC CTTGTCCGAG AGTCCCATGT 
TTTTACTAGT AATTGTCTTT ACCATGGTGG CACAATGGGC AATCGTGGAG TTCGGAGGTG 
ACTTCACACA GACGTATCCG TTGAGTTGGG AAGAGTGGAA GATCACCGTT GGTCTCGGAG 
CGATATCTTT GCCCGTCGGT TTCTTCATGC GATTGATCCC CGTTTCAGAA GATCCCTCTA 
CGTTCGCCGG TATTGAGCGA AAGAACGGCA AGCCCAAAGA GATCTGGTTG TTGACTCCTC 
TTCTGATGAT TCTGGTTCCA GTCTTCGTGG CCATTGTCTA TCAATTGGCT TACGAAATTG 
ACGAGTTTGC CCATGAGACC GAGCATCATT TACCATAGTT GGAGAATATT AGGAATTCAT 
ACTAAGAAGT TAAACGGAGC TTTGTCACCC TG 

 

Protein sequence

MPSKTASHSS TANPHGKSRV AETIRMLEAE SSDLRGLLQS INEAQSLESN RHNLETVLEG 
PQGLARRLGT DPKAGLDRET IETRRACFGA NRLPSAPRKT FGQLFLDTFD DATLQILIVA 
ALVSLAVGLY DDPATGYVEG CAILAAVLVV SFVTAVNDFQ KESQFRELSA ANDAVDVLVV 
RNNVHWQIPV DELVVGDVVC VEAGDQIPCD GVLLVADDVQ VDESALTGEP TDVDKSLQND 
PFVLSGCTME AGTARFLAIA VGKDSQWGII KAHLDKEHSQ TPLQEKLDDM AAMIGYIGMA 
AAAATFLAMM FIKVVLKPSY LAHISVFNYA LEAFIIGVTI VVVAVPEGLP LAVTISLAFS 
TKKMLADKNL IRHLSACETM GNATNICSDK TGTLTENRMT VVKGIFADTR CDDTINRVPV 
LINKKALEVI LEGIACCSTA KVIPAQAAVA NEHGIDDLHL VDDRPHIIGN KTEAALLILA 
RSSWTPHDDT DQRRVDANFG AEGGSRLFPF SSSRKCMTVF VTKDEAAVSD TSIRTRRATK 
NVQSYTLYHK GAAEIVLDKC TKYLDIDGTE KEMSDQKREE FAKLIREFAS QALRCVALAH 
RRDIQNVVDP QTVTQQDCEK KLEKEMCLDA IAGIMDPLRP DVVEAVAICQ RAGIFVRMVT 
GDNLDTAEAI ARQAGILTEG GISMIGEKFR KLTPAQLDEI LPRLQVLARS SPEDKHTLVQ 
RLNGAAIPST ESEWCEAHPN KDFATQRNLL LPGYKDEWAK SRFGVGEVVG VTGDGTNDAP 
ALKAADVGLS MGLSGTDVAK KASDIIIMDD NFASIVRAVL WGRSVFDNIR KFLQFQLTVN 
VVALTITFLA AVVGYQPPLN AVMMLWVNLI MDTMGALALG TEPPLKELLD RRPYRRDSSL 
ISRPMWRNIL CQAVFQLSLL VFLLNKGPAM FECEDGSRHH FTILFNAFVF CQVFNEFNAR 
EIGDRFDPLR SLSESPMFLL VIVFTMVAQW AIVEFGGDFT QTYPLSWEEW KITVGLGAIS 
LPVGFFMRLI PVSEDPSTFA GIERKNGKPK EIWLLTPLLM ILVPVFVAIV YQLAYEIDEF 
AHETEHHLP