Gene PHATRDRAFT_44461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_44461 
Symbol 
ID7197696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp635064 
End bp636285 
Gene Length1222 bp 
Protein Length357 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178546 
Protein GI219115501 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.844276 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTGAACATCT ATTTTGTCAT TAAGACCATG AATGAGGGAT CGTCACCAAT TGCGCAGTCT 
AGTGACTGCG AATACTTCGC CTTGGAGAAT GATGAAGGTA TGACCCGGGT AGAGTCAGGA
ATTCTATCCC CGGTTCCATT TCGCGACGAA GCGGGGTTTC GCAACGAAGA GTCCGTACGA
CTGGTGTTCG ACGAAGACAA TACTCTGCCG TCAAGGGAAG CCTTTCCGCG AAGCCCGTTT
CTAGCTAGAC GGGAGCCCGC CGAACTGAAT GGGCTCAATT ACTTGAATGT GGTGACGTAT
GCTGCCCACC TTTTTGTTTC TTGGGGAATC GGGGTCTGGG GTTTACACGG AATTCTAAGA
ACAAGATGGG AGCTAAGTCT GCAGTACGAA ACACTCGTCA TGCCTGCCCA TTGGGCGTAC
TACCTCTGGG GACCTATATT GATACTAGAG GGAATCTTTG CGCTGGCTCA ACTTTTTCCT
TACTACCGTG CAAGACCGAT AATTCAAGCT GGTTCGGGGT ACTTTTTCTT CTATACGTTT
CTGCTCCAAA CAGCTTGGAC ATTTTTCTTT TGCTTCCAGC TGTTCATATG CTCCTTTGTT
GCAGTTACTC TGACTCTTCT ATCGTTATTA GGACTTTTGG CTTCTCAGCA AAAGCATCGG
GTTCCGTCGG GCCGTTCCAG TCGCGTTGAA TATGCCCTCT TCAGGTTTCC GTTTTACTTG
CACACCGGAT GGATGGTACT GATGGCGGTG GATCATTTTG CCCTACTATT TCGTAAGCTT
AATGCAAGTC TAGGTTTACA AGTCGCGGCG GACATTTTTT CACTGGGTAT TCTTATGGCG
GTGGCCGCTG CCTATCTGGT TCGTCCCTAC AAGGCCGGTT GGGTTATTCC AGCTGTCATA
CTGTGGTCTT ATCTTGGGAT TGCCTGGCGA TTGCACACCC CGAGCGATGT CATGATGGCT
CTGTATGGCG ACACCATAGT CTCAGCCGTT CGCTATTCCG TCTTTTTTTT CGCCGGAGCA
GTTAGCTGTT GTCTTGTCCC AAATACTGTT GTTTGGGCGG CACACGAATT TTTGACAATT
AATGTGATTG AGCTGGACTA AGGTAACAGA AAGCAGATGA TCACCCTCCC TCCTGTACGA
GTATGAATAC AGCATTACGA CTTAAAAAAG TCGAATCTAT AAACAGCAGC CTCAATTTTA
ATAAAAAGAC TGTTTTCGTT TG
 
Protein sequence
MNEGSSPIAQ SSDCEYFALE NDEGMTRVES GILSPVPFRD EAGFRNEESV RLVFDEDNTL 
PSREAFPRSP FLARREPAEL NGLNYLNVVT YAAHLFVSWG IGVWGLHGIL RTRWELSLQY
ETLVMPAHWA YYLWGPILIL EGIFALAQLF PYYRARPIIQ AGSGYFFFYT FLLQTAWTFF
FCFQLFICSF VAVTLTLLSL LGLLASQQKH RVPSGRSSRV EYALFRFPFY LHTGWMVLMA
VDHFALLFRK LNASLGLQVA ADIFSLGILM AVAAAYLVRP YKAGWVIPAV ILWSYLGIAW
RLHTPSDVMM ALYGDTIVSA VRYSVFFFAG AVSCCLVPNT VVWAAHEFLT INVIELD