| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_44445 |
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| Symbol | |
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| ID | 7197739 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011672 |
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| Strand | + |
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| Start bp | 578096 |
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| End bp | 582029 |
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| Gene Length | 3934 bp |
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| Protein Length | 1163 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002178256 |
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| Protein GI | 219114921 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.671968 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTTGTTCGCT CCCAGACTCT CGTCCTTGGT GTTTGTTGGT TCCGTGGCTG CTTCTTTCTA
GATCGGTTCT CTCTGACTAT CTTTGATGAC TTCTGTTGCT GACCAGGAAG AGAACAGAAG
AAAACGGACT TTGGGTAGCT CTTCGAGATG AATCGACGGC AGCGGCGCGG AGTTGTCTGG
GCTGTTCTCG TTCTGCCATT GTTCCTTTCT CTCGGTCGTT CTGTATTCGG AGCACACAAG
TCTTCTCGAA CGGAAGCTGG TGCCGAAGCA TCCACAACGG AGTCATTGTT TGTTCTATGC
ACCGCCGACG GAACCATTTA CTCCATTGAC GCTTGGACGG GAGAATTCCA ATCAGTCGTG
TTGACTGGAT CACCGTTGAT CTCACACCAC CAGCACGCAG CTCGAGACGA GCATGCGGAA
AGTTCACACA GCATGATGGT ACCCGGCTTG GACGGAACCC TTTACTGGAA AGAAGATGGC
GGGGCACTTC AAGCTTTGCC GCTCACGATG GAATCAATTC TGGAACATCC GGTACGGTCC
TGTGATCCGG AAGACCAACA CTGTGGCATT CTCACAGCGA CAGCCCATAC ATCGCTTATT
GCCCTAGATG AGTGGGGAAA GCTAGCGTGG AAAACGATTC CCGGATCGAC GGACGACCCG
CTTCAGGCTC CGACGACTTC TTCCAATGCC GATGAGAACA CGACACCTCG TCCGAACGAA
GAACAAGCGC AGGCATCGTC GGTACTGTTA CAGCGTAAAG ACTACTGGAT CCAACATATC
TCCTCCGAAA CAGGTCGGCA AGTTTGGAAC GCGACACTAG GAATGTACCA GGCATTGGAA
TTTGATGCCG ATGAGCAAGA CGAAGAAGGT CGACTCTTGC CTGGGGCCAG TACCTCTAGA
CACTCCGGCG CTACACACTT TCCAGGCGTG GTTTTTTCGA ATGCGGGACG GACATTGGCC
GGCGTGGATC TTCAAACACA ATCCATCTTG TGGCAGATCG ACACACCTAC CGTATTGGCG
ACCGTATTTG GTATGCATGC GGGTCAATGG AAACCTGTAC ACGTGTTGCA ATCTCACCCA
TTGGAATCTG AAACAATGCC CAAAGTGGTA CAGCAACGAG CCTTGCCGGA TCGCGCCTCG
CCGGTAACAC AGTATGTAGA TTACGCGGAA CTTTGGAGAC AGCACCAATC GTCGGCGGAG
CAAACGCATC GATGGTGTCC CCGAACGACC TGTCTCCCCA ATCAACCTTG TGAATGTTCG
GAATTCAATG ACGACACTTG TGTGGATACC GAACCTTCTC GTCTCGAGCT ACCATCGCCC
ACTTCTGCAG TGCCCATGTT GGTTTCTCAG GTTGACGGTT TGCTGTTGTC CTGGCGTGTC
GTGTCGCTTA TCGTTGGGAG TTTGCTTGGA CTAGTGGTTT GTGGACAGTT TTGGTACATT
CGCAAAAAAG AAAAGTGGTC GCAAGCGACG AAGACGTCCC GATCGCGTTC TTCTTCTTTT
GCCACAAACT CGCATGAGGA TCAAGTTGAC GGACCCATGA TTGGAATGAA ACGCACCATG
AGCTTACCGG CGATTCTAAA GCCTGAAAAT TCTACCGCTC TGCCGACGCA ATCTTCGGTT
GATATTGTCC CGAGTGCTCC AGCATATTCG AGTCCTGCAC CCTCGTCGAA AGACGCCAGC
GGTAGCATTC CGTTGGTGCG GTATTCTCGG TACGCGTCCG AATTTCAAGA GCTGCGGGCT
TTAGGGAAAG GCGGATTTGG TACTGTCTTT CAGTGTCAAA ACTCCTTGGA CGGTCGAGAT
TATGCCATTA AGAAGATATT GATCCGAGGA AATGACCTTA ATTTCCAAAC TCGTTTGGAG
CGAGTTTTGC GAGAAGTCAA AATCTTGGCG GTGTTGGACC ATCCGCATAT TGTTCGATAC
TACACGGCGT GGTTGGAACT AGAAGAAAGC AATCATGACG AGAGTTTGAA CGTGGACGAC
GACGAAACAT TGTCTCGAAA ATTTTCGAGC TCACTCTTGA CAGAACAAAC AGATTGGAAT
GCCCACAAAA CAGGACACAA CAAATCGCCA AGGCCAAGAA CACAAGGGCT AATAATGGGC
GGTGAAGAAA ACGGTTGGCG AGACGATTTT GGACTTTCCG AAGAACCGTC ATTCATTGTG
CGCCGGACTT TTCATAGGGA AATCTCCGAC TGCGGCTTTA TTTTCGAAAA CAGTAACGAA
ACGGGAACGG GCACTTCTCC GGACGAGGTT ACAGCAAATC AAGACACAGA AGCGGTCGAG
GATGTCTGTT CGCATCATCA AGACCTGAAG TCGCTGGATA AAATTGCGGA TCCTGTTGTC
ACCGGCGATC TTCCTCGATC CCCGTCGAGT AGCTCAGACA TAAGCGCGAG TGTGGTCATT
GCACCCGAAC TCGCGAAGGC GTTGAAAAAG TCTAGCGACC CACCTTTACG GACTGTCCGG
CATATTTTAT ATATTCAAAT GCAGCTTTGC AGTCAAGAAA CGGTCAATGA TTTCTTGACT
GACGCGAATG CGCGAAAGGG GGTAGCGCCG GAAGGCGTCG ACGTTCCATC GGCGTTGAAG
CTATTTTTCC AAATCGCGCA AGCTGTCCAG CATGTACATG GACGGGGTTT AATCCATCGC
GATCTGAAAC CCAGCAACTG CTTTATCGAT GGATCAGGCA ACGTGAAAGT CGGTGATTTT
GGCTTGAGCC GCGAATCAAC AGACAAAGAC GAAGGGGAGG CTTCTTTTCC TCAATCTCGG
CAAGAGGATC GAGTTTTCGA CAATCACACT GCCGGAATTG GGACCCGATC ATACGCGAGT
CCGGAACAAA TGAATGGCTC AGACTATGAT TCAAGTACAG ATGTTTACTC GTTGGGAATT
ATCTTGTTTG AATTGTGCTA TCCCATGTAC ACCGGTATGG AACGCAATAT CTGTTTGAGC
CAGCTACGAT GTTTGCGCTT TCCAGAGACG TGGCATGCCA CAGTGGGACG AGGGTTTCCG
ACACTTCAAA ATCTGATCAA ATCTATGCTC AGTCCCAATC CTAATGAACG CCCCACAGCA
GGGGTCGTCG CGCAGCACAT TCAGTCGATT CTCGGGGAAT TTACGATTCA ATCTTTGGAT
CTCCAGGACG CGCCCGGTAC AATCTTGTTG CGCGTCGAAG CAGAGCATCG AGATGATGTC
CTGCGGTACA CAATGCAATG TATTCAAAAC GTGGCGGAGG AGGACGATGC AGCAGAGGGC
AAGATAGAAA TTGTACAGTA TGGTCTTCGT AGCTCAAATC GCAACAAAGA TAAACCTACC
GCCGTAATGG AGTTTGCCCT TCGATCCAGT CTTCCCGGGA CAATGTTTGT TGAGTACTTG
CGGAAACGGC CGGAGGTATT CGTTGTGAGG CAAGTGTCCC ACTCTTCGGG ATCTAGCGAC
TCGAGGAGTC ACTGACACCG AAAGATGAGG ATTGCTCAAG TGACTTTTCT CGCGTTCTCG
CTCGTAGTTC CTTCATTCTA AGGCTTCCTC CTTACGCCAC TCATAAACCT ACCATCTACT
GACCTGCATA GAAGAGTAGA AATTTGGAGC AAGGAGAATT TTGGTTCTTC GCTCCAAATG
AAGAAGTAAG ATGCTCAAAT TCTGGTGAAC ATACCACCAC TAGGCCATTG GGACACTTTA
ACGGAGCAAC TCGGCTCCAT GCCAAGCCAA ATCCATGTCT TTCATCGCGA TAAGTATAAT
ACAGGAACAA CAAGCCTTTT TTTGGGTCTG TGTTCGACAG TTTAGTCTAC ATTGCAAATT
TCCAAAAATC GGATCTGTAA CGCAGTTTAT CTTTACCAAA AGTGCAGCGC AGCCATTGGA
TCTTCAATTG AGCACATCAA AGTCTGCAGC ACGACACATG ATGAGATGTA CCAACGAAGA
TGGCTTTGCT TGGGGTGGGG AACCACCGGG ATGA
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| Protein sequence | MNRRQRRGVV WAVLVLPLFL SLGRSVFGAH KSSRTEAGAE ASTTESLFVL CTADGTIYSI
DAWTGEFQSV VLTGSPLISH HQHAARDEHA ESSHSMMVPG LDGTLYWKED GGALQALPLT
MESILEHPVR SCDPEDQHCG ILTATAHTSL IALDEWGKLA WKTIPGSTDD PLQAPTTSSN
ADENTTPRPN EEQAQASSVL LQRKDYWIQH ISSETGRQVW NATLGMYQAL EFDADEQDEE
GRLLPGASTS RHSGATHFPG VVFSNAGRTL AGVDLQTQSI LWQIDTPTVL ATVFGMHAGQ
WKPVHVLQSH PLESETMPKV VQQRALPDRA SPVTQYVDYA ELWRQHQSSA EQTHRWCPRT
TCLPNQPCEC SEFNDDTCVD TEPSRLELPS PTSAVPMLVS QVDGLLLSWR VVSLIVGSLL
GLVVCGQFWY IRKKEKWSQA TKTSRSRSSS FATNSHEDQV DGPMIGMKRT MSLPAILKPE
NSTALPTQSS VDIVPSAPAY SSPAPSSKDA SGSIPLVRYS RYASEFQELR ALGKGGFGTV
FQCQNSLDGR DYAIKKILIR GNDLNFQTRL ERVLREVKIL AVLDHPHIVR YYTAWLELEE
SNHDESLNVD DDETLSRKFS SSLLTEQTDW NAHKTGHNKS PRPRTQGLIM GGEENGWRDD
FGLSEEPSFI VRRTFHREIS DCGFIFENSN ETGTGTSPDE VTANQDTEAV EDVCSHHQDL
KSLDKIADPV VTGDLPRSPS SSSDISASVV IAPELAKALK KSSDPPLRTV RHILYIQMQL
CSQETVNDFL TDANARKGVA PEGVDVPSAL KLFFQIAQAV QHVHGRGLIH RDLKPSNCFI
DGSGNVKVGD FGLSRESTDK DEGEASFPQS RQEDRVFDNH TAGIGTRSYA SPEQMNGSDY
DSSTDVYSLG IILFELCYPM YTGMERNICL SQLRCLRFPE TWHATVGRGF PTLQNLIKSM
LSPNPNERPT AGVVAQHIQS ILGEFTIQSL DLQDAPGTIL LRVEAEHRDD VLRYTMQCIQ
NVAEEDDAAE GKIEIVQYGL RSSNRNKDKP TAVMEFALRS SLPGTMFVEY LRKRPEKSRN
LEQGEFWFFA PNEEEQQAFF WVCVRQFSLH CKFPKIGSVT QFIFTKSAAQ PLDLQLSTSK
SAARHMMRCT NEDGFAWGGE PPG
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