| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_44421 |
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| Symbol | |
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| ID | 7197879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011672 |
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| Strand | + |
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| Start bp | 498864 |
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| End bp | 503120 |
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| Gene Length | 4257 bp |
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| Protein Length | 1206 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002178236 |
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| Protein GI | 219114881 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.130794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGGTC GAAGTACCAG CTCTGTATAC TGTAGTCTAA GCTTTGTCCT GGTACTATCC
ACGATACCTG GCCAGTCCGA GCATCAAACA CAACGACGAC AATGCAAGGC TGGGAACGAC
GATGATACCT GCGACAATGG ACATGATCCA TTCGTTCGAA AGCCCCTTGA TGGCTTTCCA
GCTCGCTGTG GCCTTTACAT GGCGGAGTCG TCCATCCCAC ACGCCGGATG GGGCATGTAC
ACGGCTCAAG ATCTGTTCGA AGGTGACGCC ATCCAACCCC TCGATGTGTC CATTCCCGTC
TTTGACCTCG AGCACCATCA AAACGTGATT TCCAATAAGT TCAAGCGCGA AGTTCCCGAA
TGGCTTATGG GTCAGTACTA CTGGAACGCT GATGTGATTT ACGCGCAGTT CGACGCCATT
GACGTTAAAG GTATTTTGCC CGGTTTCGGC ATGCTCGCCA ATTCGCACGT TGGTCTGGTC
AACGCCGAAA ATGGTGGCAA TCGAGATCGA TTGGCACTCG GTCGGGAAAC ACCGCACGTG
GGAGCTTCGA GTCACTATCA GGATTTGACC TTTACCGTGC TTGATGATTT ACCTGCCGGC
CACGAAATCT TCGTTGAATA CGGCGATGAA TGGTTCGAAG ATCGATCACA CGTCTTTGGT
GATGATCTAC CTTTATCCCA TCATTTCGAG AGTGCGGACA CAATTCTGGC GCAATGGAAA
GAGGTCGTGC CGGGAGATTT GGAATCCAGC CTGGGAACCG ACTTGTACAA TTTGATACTG
GACGGCCTGG GACATTTTCT GTCGCCGAGG CTGCGCAGAG CCTTGCCACA AACTGCATCG
GATGCAGTAT CTCAGGCCAA TGGTCAAGGA ACTGCATACG CAACCGTACC TAATGTAGTT
CGCGATATTG ATTGGCTAGA AGAAAACGGA ATGTGCCTCG ACAATTTAGC ACCCCGGGAA
AATGTTGACG CCGGCAACAA GGGAGCTTTT GCGACGCGCT TTCTGTCTCG CGGTTCCCTT
GTCGCGCCAG CACCTGTCAT TCAACTATCC CGACAACACT TGGAAATGAT CTTGGTGGAT
GCGTACGACG AAGTACTTTG GCAAGGTCAC CAACTGCTAT TGAACTATTG CTACGGACAT
GCAGGTTCTT CACTTTTATT TTTTCCGTAC AGCCCCGCTA CCAACCTTAT CAATCACGGT
TCCGGAGAAA GGGCCAACGT CGGGGTGCGC TGGTCGGACC GAATGTCAAA CCCTGAAATG
CTGCAGTGGA CAGCTGACGA AATCCTAGAA TCCAACGAGA AAGCTGGTCT CATGATGGAA
TTTTACGCGC TACGCGACAT CCAACCGGGG GAAGAAATAT TATTGGACTA TGGAGACGAA
TGGCAAGACG CGTGGGATCG GCACGTTAAC GACTGGCGAC CACCGATTTA CGAAACGGAT
TATACGCCGG CGTACACTTT CGACCGTCAT GATGAAATTT ATACGTTGGA AGATGGAGAT
CTGTATCCAC CGCCCTATGT GCAGGTTCGT TGCTACGTGA ACGAAGACGA ACCAGGCGTA
CCAGATGAGG ATGGATGGTA CCAGTGGACG CCTGTTGAAA ATGAGGATTT GTCGTACACC
GTTCCTTGTA CGGTTCTTTC GAGCGATGCA GTCAACGATA AAGAAAAGGC CTACCGAGTG
CAGGTCAACG CAAACGAAAA CCTCAAATTC AAAGCTGCAC CGTGGTCGTC TATTACTTTT
ATCGACGTGA GTTACACAGG CAATCAGCAT CTTCGACAAG GGTTCCGACA CGAAATCAAA
CTACCTGATG CAATGGTACC CGATTGCTGG CGTGACATTG AAAATCCTCC CGACAACGAA
CTGTGTAATT TGTTCATGGC CGAGTCTGCG ATACCCAACG CTGGTCTCGG CATGTTTACG
GCGCGACGGT TGGACAAAGG CGAACTGATA TCTAGCGGAG ACGTAGTGCT CCAGATCGAA
GACGCCGACT TGAACAAGAA CCTTCGCTTC TGGCGGCAAG GTATTACTGA TATCGACGAA
CCCCCGTGGC TATTGGAAAA TTATTTCTGG AATCCATCCA ACACCTTTGG ATCGTTCGAA
GCACATGATG TGGAGAGTAT TGTACCAGGC TTGGGCATGC TAGCGAATTC ACATCCAGGA
CTGGTGAACT CGAAAATGCT GCCGTCCTCA GCAACAGCTG ACTTGCATCG CGGCCTAGAC
CCAGGTGCTG GTGCATCGAC ACACTACCAT AATGTTAGGT TCAGAGCTAC CGACAAAATT
GAGGCTGGCA CAGAACTTTT TGTGAAGTAC GGCGACAGCT GGTTTGAAGA GCGAGAAGAT
CTTGGGCCTA TTCCATTGTC GGACGACTAC CAACGAGCTG ATCGAACTGT GAAACGTTTT
TGGAAAATTA TCGATGGCAA CACGACAAGA GAACTGGCAC GTGATCTGTG GGACTTCATT
TTACAAGCAT CATCTATTCC TATGCGCCAC AACATTGCAC TACCACAAAG CCTTGAGAAT
ATAGAAAGTA TCTTGAATAA AGGTTCCGCT TATTACTCAG TTCCGGACCG CATTAAATCA
ATTGGATGGC TCGAGGAGAA CGGACGCTGC CTAGACAACA TTCGCCCCAG TCAATCAAAG
CTTCGTCAGG CTGGAAAAGG GGCATTCGCA ACGCGAGCAA TTCCGAAAGG AAAAATTATA
GCTCCGATGC CCGTGGCGCA TGTTCGACGG CATCATATGG ATATCTTCGA CAGTGACGAC
CACAGCGACC CTTCAGCGAA CGTTTGGAGC GACGGAACTC AGGTACTCAT GAACTATTGT
TACGGCCATC CCAATAGTAC CCTGCTTCTA TTTCCCTACT CACCGGTGGT AAACTACGTC
AATCACAATG CAACTTCAGC CAACGCTGAG CTGAGGTGGT CGAAGCTGCC CAATCACCTT
GAAAGCTGGT TGGAACGAAC TCCCGATAGT CTTGATTCGG AGGAGCACGC AGGTTTGATA
ATGGAGCTAA CCGCAACCAG AGACATAAGC GCTGGCGAAG AAATCTATTT GGATTACGGC
ACTTCTTGGG ATGAAGCATG GGCAGATTAC GTTGCAAATA AATTTCGTCC GACAGGCGAG
GATTTGTTGT ATAGGTCAAG CGCTGATCTC AACAGAAGAG TCGAATGGAT CAAGACACGA
TCCGAACTCG AAACAGAACC GTACTACTTC GAAAGCGCCT TTACCGCTTG CTTTGTGGGG
AGAAGTCAGC GAACAGGCAA TCATGATGAG GCTGACGATA GTAAGCTTCA GCAATTCTTG
TGGACGCCGG TAGTCGGCAT GTACGATGAC ACATACAACG CATACCCTTG CACTGTTTTG
GAGCGGACCG TCAATGACGT CGAAGGGTAT GCACCTCATC GTAGAGACAG CGTGTGGCCA
ATGGAAGTTA CTTACAAAAT TCGTCTCCAT CAGCAAAATG AAGGCGATGT CATCATGACG
CAAGTACCAC GGCGAGCTAT ACAGTTTTTT GATCGCGCCT ACCAATCGGA TTTGTTCATT
CGTAGTGCCT TTCGGCACGA GATTCATTTG CCTGACGCAA TGGTTCCACC AGCCTGGCGA
GACTTGATAG AACTAGTGTG AAGGTGAACA ATGTACAGCA AACAGGGATG ATTCACCTAT
AAAAAGTCCG CATCGGTCAA CTCTTCGCCG AAATATGCAA ATAGCTTTTC CAATGCCGGT
CTTTGTAGTT GTGTGTTGCG CTGAGTAGAC CGCATCAAGT CAACGAAACG TTCATCGTGG
TAATTATTCG GTTGCCAGTA CCACAACTGC TGAATGAAGT ATACGTATCG TTTGGCCTCG
TGAATCATAT CCCTCGCTAG ACAAAATTCT AAAATCTTGG TATGCGTCAT GTACGGTGGC
AAGACGTCGT GTTGATTGAA AAAATCCTGA ACCACCGTCA CGGCAGCCGC CACGTCCCCT
ACATTCAAAA GCCCATCGAC AATTGCGCGC ACGGTAAACG GATCCGGACG TAAACCATGG
TTCAGCATTT TTCGAAAATA CTCTTGGGCA GTAGCGACGT CGCCTACTGC TGCGAGTCCG
CCCAAAATAA GATCAAACGA AATGTTGTTA GGCTCACAAC CGGACGTCGG CATTACGGTG
TCCAGAACGT CCATGGCTCT CCAGAGGGCG CCTCGATGTA CGCAAGCCTT GATCAATGCG
TTGTAACTGC CAACATCGAG ATCTAGGGGT TGATGCCCAC AGGCACCTTG CTGCAAG
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| Protein sequence | MKGRSTSSVY CSLSFVLVLS TIPGQSEHQT QRRQCKAGND DDTCDNGHDP FVRKPLDGFP
ARCGLYMAES SIPHAGWGMY TAQDLFEGDA IQPLDVSIPV FDLEHHQNVI SNKFKREVPE
WLMGQYYWNA DVIYAQFDAI DVKGILPGFG MLANSHVGLV NAENGGNRDR LALGRETPHV
GASSHYQDLT FTVLDDLPAG HEIFVEYGDE WFEDRSHVFG DDLPLSHHFE SADTILAQWK
EVVPGDLESS LGTDLYNLIL DGLGHFLSPR LRRALPQTAS DAVSQANGQG TAYATVPNVV
RDIDWLEENG MCLDNLAPRE NVDAGNKGAF ATRFLSRGSL VAPAPVIQLS RQHLEMILVD
AYDEVLWQGH QLLLNYCYGH AGSSLLFFPY SPATNLINHG SGERANVGVR WSDRMSNPEM
LQWTADEILE SNEKAGLMME FYALRDIQPG EEILLDYGDE WQDAWDRHVN DWRPPIYETD
YTPAYTFDRH DEIYTLEDGD LYPPPYVQVR CYVNEDEPGV PDEDGWYQWT PVENEDLSYT
VPCTVLSSDA VNDKEKAYRV QVNANENLKF KAAPWSSITF IDVSYTGNQH LRQGFRHEIK
LPDAMVPDCW RDIENPPDNE LCNLFMAESA IPNAGLGMFT ARRLDKGELI SSGDVVLQIE
DADLNKNLRF WRQGITDIDE PPWLLENYFW NPSNTFGSFE AHDVESIVPG LGMLANSHPG
LVNSKMLPSS ATADLHRGLD PGAGASTHYH NVRFRATDKI EAGTELFVKY GDSWFEERED
LGPIPLSDDY QRADRTVKRF WKIIDGNTTR ELARDLWDFI LQASSIPMRH NIALPQSLEN
IESILNKGSA YYSVPDRIKS IGWLEENGRC LDNIRPSQSK LRQAGKGAFA TRAIPKGKII
APMPVAHVRR HHMDIFDSDD HSDPSANVWS DGTQVLMNYC YGHPNSTLLL FPYSPVVNYV
NHNATSANAE LRWSKLPNHL ESWLERTPDS LDSEEHAGLI MELTATRDIS AGEEIYLDYG
TSWDEAWADY VANKFRPTGE DLLYRSSADL NRRVEWIKTR SELETEPYYF ESAFTACFVG
RSQRTGNHDE ADDSKLQQFL WTPVVGMYDD TYNAYPCTVL ERTVNDVEGY APHRRDSVWP
MEVTYKIRLH QQNEGDVIMT QVPRRAIQFF DRAYQSDLFI RSAFRHEIHL PDAMVPPAWR
DLIELV
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