Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_44400 |
Symbol | |
ID | 7197864 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011672 |
Strand | - |
Start bp | 438719 |
End bp | 439920 |
Gene Length | 1202 bp |
Protein Length | 335 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178510 |
Protein GI | 219115429 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.127198 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GATTGGACAA TGGGGGCGAC GTTAGAGGTG AAGGCACGGT GATGCATCTG ACGTCAGTGA AGTACGATCG AATCGGTTTG CGTTTATTCG GGAAGTTAAC ATGTTTGTGT TGGTAACTGT CAGAACAGAT GAACGGCATG CCAAGCATTT ACCGTCAGAA GTACTCCTCT TCATTCAACC ACTACCTACC ATGAAGGCAG CGTCCGCTTC TTTCTTACTT TTGGCAGCAG AAGCGACTGC CTTCTCAGCT CCAAAAGTAG GCGATAATGG AGTGCCGAAA TCTATGCAAA ACCCAGTGGA TAACGCCGGC CGGCGCCAGA TCCTATCGTC ACTCGTTGCA AGCGGTTTCA GTGGAATGAT GGCATTTTCG AAAGTCCAAT CGGCTATCGC TGCCCCAGCT GCACAGGATT CGCTAGATGT TGAAAATTTT CTTCGGACAG GAATAGACCT CGGGGGAAAT ATGGGAGTTA GTAGCCAGGC TGGAAAATCC AGACCCCAAA CAGGCGTAGT TCTCCGAGAC GGGAGCGAAG TGCAGCAGGA CAGTGCCGGA AACGTACTAG CGGAGATTTT AACGGGAAGC AAAGCAAATC CCTACGCAGT TCTGGTGAGC TTTGGTAGTC CTTGGAAGCT TGAAACAGGA CCTGTTTTTG ATATTGAATG CCGCGATGCA AAAACTGGAG ACGGGGCGTT TGTGGCCGGT ACGTACTACA CGTTGAACCT GCATCGATGG TAGGGATAGT TGGCTAGAAA CCATTTAAAG ATTCTGAAGT GTTCTTACCT GCTCTTTTCC AGTCACAAAC AATGTTTCAG GGAGAAAACT CGACGATCTT CCGTCCTCTT TCTTTCTTGA TCGCCTCTTC GAATCTACAG GTCGCTTTTC TTTTTATGGC CCACCAACCG ACGTCAAGAT TAGGAAGTCG GACACGAATG GTAACTACCG CGTCATCGAA GTCTCTTACA GCAACCTTTC CCAATCAACC AATGCTGAAA TTCCTCGTCG AGCAGTATTA GTGGCGACAA TTCCAGCTGG AACAAACAAT GCGGTAATGC TGGTTGGTAG TTCCACAGCT ACCCGATGGC GCAAAGGGTC GGAGGAAGAA GTCCGGAACA CAATTGCTTC CTTTCGTGCG ATTCCTGCAC CCAAGTCGAA CCTTAAATTG CGTTCCAAGC CGCGTGGCGG CGAACCAATT GATTTCACTT AG
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Protein sequence | MFVLVTVRTD ERHAKHLPSE VLLFIQPLPT MKAASASFLL LAAEATAFSA PKVGDNGVPK SMQNPVDNAG RRQILSSLVA SGFSGMMAFS KVQSAIAAPA AQDSLDVENF LRTGIDLGGN MGVSSQAGKS RPQTGVVLRD GSEVQQDSAG NVLAEILTGS KANPYAVLVS FGSPWKLETG PVFDIECRDA KTGDGAFVAV TNNVSGRKLD DLPSSFFLDR LFESTGRFSF YGPPTDVKIR KSDTNGNYRV IEVSYSNLSQ STNAEIPRRA VLVATIPAGT NNAVMLVGSS TATRWRKGSE EEVRNTIASF RAIPAPKSNL KLRSKPRGGE PIDFT
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