Gene PHATRDRAFT_44400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_44400 
Symbol 
ID7197864 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp438719 
End bp439920 
Gene Length1202 bp 
Protein Length335 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178510 
Protein GI219115429 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.127198 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GATTGGACAA TGGGGGCGAC GTTAGAGGTG AAGGCACGGT GATGCATCTG ACGTCAGTGA 
AGTACGATCG AATCGGTTTG CGTTTATTCG GGAAGTTAAC ATGTTTGTGT TGGTAACTGT
CAGAACAGAT GAACGGCATG CCAAGCATTT ACCGTCAGAA GTACTCCTCT TCATTCAACC
ACTACCTACC ATGAAGGCAG CGTCCGCTTC TTTCTTACTT TTGGCAGCAG AAGCGACTGC
CTTCTCAGCT CCAAAAGTAG GCGATAATGG AGTGCCGAAA TCTATGCAAA ACCCAGTGGA
TAACGCCGGC CGGCGCCAGA TCCTATCGTC ACTCGTTGCA AGCGGTTTCA GTGGAATGAT
GGCATTTTCG AAAGTCCAAT CGGCTATCGC TGCCCCAGCT GCACAGGATT CGCTAGATGT
TGAAAATTTT CTTCGGACAG GAATAGACCT CGGGGGAAAT ATGGGAGTTA GTAGCCAGGC
TGGAAAATCC AGACCCCAAA CAGGCGTAGT TCTCCGAGAC GGGAGCGAAG TGCAGCAGGA
CAGTGCCGGA AACGTACTAG CGGAGATTTT AACGGGAAGC AAAGCAAATC CCTACGCAGT
TCTGGTGAGC TTTGGTAGTC CTTGGAAGCT TGAAACAGGA CCTGTTTTTG ATATTGAATG
CCGCGATGCA AAAACTGGAG ACGGGGCGTT TGTGGCCGGT ACGTACTACA CGTTGAACCT
GCATCGATGG TAGGGATAGT TGGCTAGAAA CCATTTAAAG ATTCTGAAGT GTTCTTACCT
GCTCTTTTCC AGTCACAAAC AATGTTTCAG GGAGAAAACT CGACGATCTT CCGTCCTCTT
TCTTTCTTGA TCGCCTCTTC GAATCTACAG GTCGCTTTTC TTTTTATGGC CCACCAACCG
ACGTCAAGAT TAGGAAGTCG GACACGAATG GTAACTACCG CGTCATCGAA GTCTCTTACA
GCAACCTTTC CCAATCAACC AATGCTGAAA TTCCTCGTCG AGCAGTATTA GTGGCGACAA
TTCCAGCTGG AACAAACAAT GCGGTAATGC TGGTTGGTAG TTCCACAGCT ACCCGATGGC
GCAAAGGGTC GGAGGAAGAA GTCCGGAACA CAATTGCTTC CTTTCGTGCG ATTCCTGCAC
CCAAGTCGAA CCTTAAATTG CGTTCCAAGC CGCGTGGCGG CGAACCAATT GATTTCACTT
AG
 
Protein sequence
MFVLVTVRTD ERHAKHLPSE VLLFIQPLPT MKAASASFLL LAAEATAFSA PKVGDNGVPK 
SMQNPVDNAG RRQILSSLVA SGFSGMMAFS KVQSAIAAPA AQDSLDVENF LRTGIDLGGN
MGVSSQAGKS RPQTGVVLRD GSEVQQDSAG NVLAEILTGS KANPYAVLVS FGSPWKLETG
PVFDIECRDA KTGDGAFVAV TNNVSGRKLD DLPSSFFLDR LFESTGRFSF YGPPTDVKIR
KSDTNGNYRV IEVSYSNLSQ STNAEIPRRA VLVATIPAGT NNAVMLVGSS TATRWRKGSE
EEVRNTIASF RAIPAPKSNL KLRSKPRGGE PIDFT