Gene PHATRDRAFT_44394 details

Gene Information

• Locus tag: PHATRDRAFT_44394
• ID: 7197859
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011672
• Strand: -
• Start bp: 418119
• End bp: 420217
• Gene Length: 2099 bp
• Protein Length: 668 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002178505
• Protein GI: 219115419

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.0000898741
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TCTGGCACAA TTCCATCGTC CAATTATCCC TTCATTTCCC GAGCAGATCC TTCCACACCA 
CATTATAGAC AGCATGGCCA AGCTCGTCGT CGCTGATGCC GTTGAGCGTA CGCCGCCGGT 
GGAAGCCGAC GCTGCCGGGG GTGCTGTCCA CGTGACCAGG GCGGCGCCTC TCACGAAACG 
TCAAAAACGC AAACAACCGA ATGACAAGCA CGCGTGGCCC CAGCAGCCCA AGATTTCGTC 
CCCCGCCGCT CGTGCCAACG CATACTTGCG CGTCGCCGGA CTCAACCAAA AGGAAACCCC 
GAAGGACGCC TTGGATCCCG ACCTTGATTT GCATTCTCCC CAGGTTAAGT TTGGGCGATT 
GCTAGGCAGT ACCGATCAAC GGGTACGTCA CCGGGCTATT CTGCAATTGG AGCAATACCT 
CAAGGCTCGG TGCGATATTA ACAACGAAAC GGGCGGAATT TCGGAGCTTG ATCTACTAAA 
ATTGTGGAAG GGAATGTGGT ACACTCTGTA TATGGCTGAT AAGGCACCAG TACAGGAGGA 
ACTCGGCAAA AAGATCGCCC GTCTGATCTG GTGCTTGGCG GGCACCGAAG AGGAGGACGA 
ATATGCTGGG CAGGCTTATC TGGAAACGGT TGGTGATGAT GGACCCATTG GCTTTGAAAA 
TGACGAGGAA TCCGATGACG AGGAGGTCAC CATGGAGGAG ATTGAGAATA CCTTGGAAAT 
GAATGGTAGC GAGGACGAGG AGTCGGACGA TACATTAGAG ACAAAAGACA CTACGAACCA 
TCACATGCAT GAACTAGACT CTAATCACGA GGACGATGGT GATATCGAGG ATCTGGAAGA 
TTCCGAAATT CCCCATTGTC GCGGAGCACA TTTGGCCACT CTCTTTGTGA AAACATTCTT 
TCACACTGTT CGTCGCGAAT GGGGCAAAAT GGACAAGTAC CGGGTTGACA AATTTTATAC 
ACTCATGCGC TTAATGATGC ACGAAGTGTA CGAATACATG GCCGTCCGTC ATTGGAATGT 
GGGCATTATT CGACTTTTCA ATGACGCCAT TTACGAAGAA GTTTTGACAC AAACACCCAA 
TGGGTTGCGC CTTCATTTGA TTGACCTAGT TTTGGATGAG GTAGTAGCTG TCAACGCCAA 
AGCTCCGATG CCTCTAACGG AGGCGACTTT CTTGGATTGT TTAGAGCCAT TCTTTGCCAT 
GGCGCAGACG GGAGCAGGCG AAGATTTGAT TCAGCAACGT GTACTAGAAA ACATTTTTGT 
CAGGTTCCTG AACAAATACA GTGTGGTGAA CGAGCACGCA CTGGATGAAG GCACCAAATC 
AGACTCCTTC ATCCTCGAGC AGGTACATGT TGCAACTGTA GCTCAATATA TCTTTGAGCT 
GGCTAGTGAC GGGGCAACAA AAGATCGCTT TCGCAAGTCA ATGTACAGTC TGCACAAGCA 
GTACATCCGA AGACTGAAAA CCGTTGGAAA AGATGTTGTG CTGCAGGACG AAGAAAGCGA 
AGAAGAAAAA GAGGAGCACA ACATCACCGT CGCATCTATT CAACCGATGG AAGAAAATTC 
GGGTGCACTA AAGGAAACCG AGAAAGCAAG TGAAAACGAC GAGGTCGGAT CGGCCTCCAA 
CAAAATTATC GAGTCGAAGA CATTGGATAA AAAGAAACGT AAACGAAAGA AGAATAAGAA 
AAGCTCGACT GGATCTGATG CTGTAGAACA GGACAGCACT ACTCCAAAAG AAGAAGAGGT 
TACTATATCT GTAGAGGAGC AAAAAGCTGC GAAGGATGCC ATGATTCCAA ATGAGAGGAA 
AGTTGACGAT ATCAACCCAA AAGCATCATT GCAGAAAAGG CGCAAAACCG CGACCAAGCG 
AGAATCTGAG CAAAATGATC GTAAGCGCGT AAAGTTTGGC TCGAAGAACC AAGCTATATC 
CTGGAAGGAA TCGATGAAAA ATTTGAGAAC GAGAGATCCA CCTGAGCCAA GAACAGCAAC 
CCCTGAAAAG GGTATTCTTC TAAACAAAAA TGCAAAATCG GCAATAATTC AAGGGTCCAA 
AGGGAAGAAG CGACGAAATA AGGCAGTAGA TTTCTTTTGA GTATCATTGA TAGTAAGCA 

 

Protein sequence

MAKLVVADAV ERTPPVEADA AGGAVHVTRA APLTKRQKRK QPNDKHAWPQ QPKISSPAAR 
ANAYLRVAGL NQKETPKDAL DPDLDLHSPQ VKFGRLLGST DQRVRHRAIL QLEQYLKARC 
DINNETGGIS ELDLLKLWKG MWYTLYMADK APVQEELGKK IARLIWCLAG TEEEDEYAGQ 
AYLETVGDDG PIGFENDEES DDEEVTMEEI ENTLEMNGSE DEESDDTLET KDTTNHHMHE 
LDSNHEDDGD IEDLEDSEIP HCRGAHLATL FVKTFFHTVR REWGKMDKYR VDKFYTLMRL 
MMHEVYEYMA VRHWNVGIIR LFNDAIYEEV LTQTPNGLRL HLIDLVLDEV VAVNAKAPMP 
LTEATFLDCL EPFFAMAQTG AGEDLIQQRV LENIFVRFLN KYSVVNEHAL DEGTKSDSFI 
LEQVHVATVA QYIFELASDG ATKDRFRKSM YSLHKQYIRR LKTVGKDVVL QDEESEEEKE 
EHNITVASIQ PMEENSGALK ETEKASENDE VGSASNKIIE SKTLDKKKRK RKKNKKSSTG 
SDAVEQDSTT PKEEEVTISV EEQKAAKDAM IPNERKVDDI NPKASLQKRR KTATKRESEQ 
NDRKRVKFGS KNQAISWKES MKNLRTRDPP EPRTATPEKG ILLNKNAKSA IIQGSKGKKR 
RNKAVDFF