Gene PHATRDRAFT_44382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_44382 
Symbol 
ID7197851 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp386588 
End bp387912 
Gene Length1325 bp 
Protein Length260 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178497 
Protein GI219115403 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.329065 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGAACATAAC TCCATAGTGT GTACAACTCC ATTCTATTGC CTTTCGATTT TGCTGTGATG 
TTACGCCGTT TAGCTTTGCT CACGGCGCTG TTGGCTTCGG CTGGTAAGTT GTAGTTAAGG
ACTGCTGCCC TGATGCTTGA GGTGACGCTC AATCATTTTG TTTGTTGTTT TCTCACATTT
TTATCCATTT CTTCTATCGT TTATCCAGAT GCTTTTACGA TCCATCAAAA ACCCGCGATG
GTATCAGCTT CGACGAGGTA AATCCAATTC CATGATCAAC GAGATCCATG GCTTCATCAC
GAAGTTCGTA GTTCGTTGTC TGGTTACAGT ACTCACCATG TTGATTCTCC TTCTGATTTT
ACACAGATTG TCAATGCGAA GTCCCTTCAT GATGCCCGAG GAGGTACGTG TGCACCGACT
TGTCATCAGT AGATGGATAT TGCGTCGATA GATTGACAAT TCACCGTTTG CGCTGCTCGC
TGTGCCCACT TTTTTTTCAT CAGCCTGACG AAGCCCCCAA ACGGGCTCCT CGTCCCCCGC
GTGCCCCACC ACTGCCCACC GTTGACGGGA AATCGGGACA ATTAGACGTG GTCAGCCGAC
TTTTGAAAGA CCGCATTCTG CTCTTAGGAA CCGACGTCAA TGATGAAGTT GCCAACGTGT
TGGTTGCGCA GCTTTTGTAC CTGGCGAACG AAGATCCCAA CAAGGACATT ACGCTCTACA
TCAACTCACC TGGTGGTACG TCGTGTATGC GTTCGTTCGT TCGCCAAAGA GAGTGAGAAT
ACTTGTTGAA TATGGCCCCT CACAATGATG CTTCCACTTA CTCCAGGTTC CGTTTCGGCT
GGCTTGGCCA TTTACGATAC CATGAAGTTC ATCCCCTGTG ATGTACAAAC AGTTTGCTTT
GGTATGGCCG CTTCCATGGG AGCATTCTTG CTGGGCGCCG GGACTCCCGG CAAGCGCAAG
AGCCTACCCA ACGCCCGGAT CATGATTCAT CAGCCACTGG GAGGTGCGCA GGGGCAGGCC
CAGGATATCG AAATCCAGGC CAAGGAAATT CTTTACACCA AGGCACTGCT GAACAAATTT
ATTGCGGACT ATACCGATCA ACCGGAAGAG AAAATTGCCG CCGATTGCGA TCGGGACTTC
TTTATGACTC CATACGAGGC CCTGGACTAT GGTATCATTG ATGAGGTCAT CAAGACGAAA
ACGTCGCACA TTCCCATGCC GGCCATGCCG AGTCTCCGAA ACTAAGGTGG CACCTATTTG
AAATACTGTA GACACGCTTT AGGCGTAGCT CAATTTATAT TTTAGCAGAG ATGCATTGCT
TTTCT
 
Protein sequence
MLRRLALLTA LLASADAFTI HQKPAMVSAS TRLSMRSPFM MPEEPDEAPK RAPRPPRAPP 
LPTVDGKSGQ LDVVSRLLKD RILLLGTDVN DEVANVLVAQ LLYLANEDPN KDITLYINSP
GGSVSAGLAI YDTMKFIPCD VQTVCFGMAA SMGAFLLGAG TPGKRKSLPN ARIMIHQPLG
GAQGQAQDIE IQAKEILYTK ALLNKFIADY TDQPEEKIAA DCDRDFFMTP YEALDYGIID
EVIKTKTSHI PMPAMPSLRN