Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_44382 |
Symbol | |
ID | 7197851 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011672 |
Strand | - |
Start bp | 386588 |
End bp | 387912 |
Gene Length | 1325 bp |
Protein Length | 260 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178497 |
Protein GI | 219115403 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.329065 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CGAACATAAC TCCATAGTGT GTACAACTCC ATTCTATTGC CTTTCGATTT TGCTGTGATG TTACGCCGTT TAGCTTTGCT CACGGCGCTG TTGGCTTCGG CTGGTAAGTT GTAGTTAAGG ACTGCTGCCC TGATGCTTGA GGTGACGCTC AATCATTTTG TTTGTTGTTT TCTCACATTT TTATCCATTT CTTCTATCGT TTATCCAGAT GCTTTTACGA TCCATCAAAA ACCCGCGATG GTATCAGCTT CGACGAGGTA AATCCAATTC CATGATCAAC GAGATCCATG GCTTCATCAC GAAGTTCGTA GTTCGTTGTC TGGTTACAGT ACTCACCATG TTGATTCTCC TTCTGATTTT ACACAGATTG TCAATGCGAA GTCCCTTCAT GATGCCCGAG GAGGTACGTG TGCACCGACT TGTCATCAGT AGATGGATAT TGCGTCGATA GATTGACAAT TCACCGTTTG CGCTGCTCGC TGTGCCCACT TTTTTTTCAT CAGCCTGACG AAGCCCCCAA ACGGGCTCCT CGTCCCCCGC GTGCCCCACC ACTGCCCACC GTTGACGGGA AATCGGGACA ATTAGACGTG GTCAGCCGAC TTTTGAAAGA CCGCATTCTG CTCTTAGGAA CCGACGTCAA TGATGAAGTT GCCAACGTGT TGGTTGCGCA GCTTTTGTAC CTGGCGAACG AAGATCCCAA CAAGGACATT ACGCTCTACA TCAACTCACC TGGTGGTACG TCGTGTATGC GTTCGTTCGT TCGCCAAAGA GAGTGAGAAT ACTTGTTGAA TATGGCCCCT CACAATGATG CTTCCACTTA CTCCAGGTTC CGTTTCGGCT GGCTTGGCCA TTTACGATAC CATGAAGTTC ATCCCCTGTG ATGTACAAAC AGTTTGCTTT GGTATGGCCG CTTCCATGGG AGCATTCTTG CTGGGCGCCG GGACTCCCGG CAAGCGCAAG AGCCTACCCA ACGCCCGGAT CATGATTCAT CAGCCACTGG GAGGTGCGCA GGGGCAGGCC CAGGATATCG AAATCCAGGC CAAGGAAATT CTTTACACCA AGGCACTGCT GAACAAATTT ATTGCGGACT ATACCGATCA ACCGGAAGAG AAAATTGCCG CCGATTGCGA TCGGGACTTC TTTATGACTC CATACGAGGC CCTGGACTAT GGTATCATTG ATGAGGTCAT CAAGACGAAA ACGTCGCACA TTCCCATGCC GGCCATGCCG AGTCTCCGAA ACTAAGGTGG CACCTATTTG AAATACTGTA GACACGCTTT AGGCGTAGCT CAATTTATAT TTTAGCAGAG ATGCATTGCT TTTCT
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Protein sequence | MLRRLALLTA LLASADAFTI HQKPAMVSAS TRLSMRSPFM MPEEPDEAPK RAPRPPRAPP LPTVDGKSGQ LDVVSRLLKD RILLLGTDVN DEVANVLVAQ LLYLANEDPN KDITLYINSP GGSVSAGLAI YDTMKFIPCD VQTVCFGMAA SMGAFLLGAG TPGKRKSLPN ARIMIHQPLG GAQGQAQDIE IQAKEILYTK ALLNKFIADY TDQPEEKIAA DCDRDFFMTP YEALDYGIID EVIKTKTSHI PMPAMPSLRN
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