| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_44347 |
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| Symbol | |
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| ID | 7197826 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011672 |
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| Strand | + |
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| Start bp | 290217 |
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| End bp | 292744 |
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| Gene Length | 2528 bp |
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| Protein Length | 646 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002178201 |
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| Protein GI | 219114811 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00207317 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACCA GAGGTAGACG CGAATCTAAG GATTCACCGT GAGTATAGTA CATTCTGACA
AATTGATAGC TTCCTTATTG ACATTGCAGT CCTATCGAGG GTAACAGATG GCTAATTCTC
TGCTCACATG AGAGGCTGTT CTTCAACAGT AAAAAAGGTT GCCAAACTTC AACATTGAAA
ATAGCCTCTA GAGAGTTGGA TGAACATAAG CTCTTCATTT TACGAGAGGT TCATTTGATA
TGCACCCCCG AGGGAACCTT ATGGAAGCGG GTATGAACTG ATGCGGCAGG CCATATCTCA
ATGAAAACAT CGGCCTTTCT AGGCCTCAAG CAAACGAAAT CTTTCATGCT CAATTAATAG
CTAAGACAAA CACGGCCTTT GAAATTCAGA TTGGCCTGAC AGCAAAATAG CCTAGATTAA
GTTCTTGATG CGTGCACACT ATGTAGCCAT CCACTATTTG ATAGATTTCG CTGACAATCA
ATCTTTTTTA GGCCTCCCCA AGGTCTCACG AAATCAAAGT TAAAAACTAA TCCCAGCTCC
TCAACCCCAT TTCTTGCATC ACTCATACTT TTGAAGCACG ATCTCCAAGT TACACTCTCT
TATCAAGGTA AGTATGCCCT TTCCGAAGAT AGAAAGAGGT TTCGTGCAAC AAGTGCTCAC
TGACCACATT TTGTTTTACA CACGCTATCT CCTATTAGAT GAAATTGACG AAAGCTTTTA
ACATACTGGC TGTCTTGGCA GGTGTCAACA CCATTGCCGC TGATTGCACG CATGGTCGTC
TCTTTGTCTC CGACATGGAC TCGGCTAATG TTTATACCTA CGAGATTGAT GGAACTAGTA
ATCCCGTCTT GCTCAACACC CTGCCGACGG TGACAGGAAT GGGCCCGCAG TTTTTGTACA
CGTCGTCTAC AGAAGGAGCT GTTACCGTTG TCTACCGTGG ATTGGAAGAA ACTGCGTATC
AGGATGGAGC TATCAGCTTC ATCCGGGTTG GAGTCACTCC AAGCAGCCAC GAAGTCGCAG
GTTTCTCTGT CGAGAAGGAA GACCCTTCTC TGGTTGACGA CTTTTTTGTG AGCTGTGCCA
GACCTATACA TCACGTGGCT CATGACCAAA AGATTGCCAT ATTCTGTGAC GGATCATTTG
AAGATAGCGT CAACTCAACA GTCTGGGTTG TTGACGAACG CTTTTTTGGG CAAGGCAACA
AGACATTGGT CTTTTCCAAG ACGCTGGAAG GTTCTCATCA TGGTGTTGCC GTCCCAGTGG
ATGAGGACCA TATTCTTGTC TCCGTGCCCA CACCGGAACG CGTGGCAAAT GATCCTAATG
CAAGTGCACT TCCTGACGGG TTCCATGTCT ACGACTATGA TATGAATTTG TTGCATGGCC
TGAATGAGGA AGAAGATCCT AGTCGTTCTT GCGCGGGTTT CCACGGAAGC GGTGTAATTG
ACAACACCTT TGTGTTTGCT TGCGATCAGG ATCATGGCGG GATCCTTGTT GTTGACTATG
GTCAAGCAGG TGTTACTTAC ACTTCTCGAG CTCTCTCCTA TCCGGATGGC TTTGATGCCC
ATCGGACTGG AACCTTAACA GAGCATCGTG ATAGCAACGC CATTGTCGGT AATTTTGCTG
ATAGAGCCAC TGGAGATTCT AAGCTTGTTT CATTCGTACC GAAGCAGCAA TCTGATGAAA
TCACTGAAGG ACAACTTCTG CCTCTGGAAT CGGGTCAATG CAGTTTCAGC TTTGAGCAAT
CGGGTGGTAA CCTAATCCTT GCCTGGATGC CGACAGGAAA TCTTCAAGTT TATGCTATTG
AGCCTGAATG GATGCTACTT GCCGACATCC AGGTAATCGA TGACATGTCT TCTTGCGACG
GAACTTCAAT GGCACCGGGT CAAGGACATG CCTACATCAT GCAAGGAACT TCATTGATTG
ACGTTGATCT TCATGACTTG ACGTCGCCGG AAATATCTAG CATTGATCTT GGCTTTATGC
CAGCATCAGC AGTGGTGGCT GGAGTTCCGG CTGGTTATGC CTGCGAGGCT CCCAGCTTTC
CTGAGACCTC TTCCACATCT GCTGTTGATG GATGGATCTC GATTGAGCAA GTCCTTGCTC
CTGCCGGTTC TACTGAATCA ACAGAATTTC TTCGGTCTTT CCGCAATGAT ATTGCTAGAA
GTCTTGGAGT TGGCCTCAAT CGCGTTTTCG TCGAAGAAAC AGTCAAGGAA TCGGATAGTT
CCACCGTTGT CCATGTCAAG ATGAGCGACC CCACGGAACA TGATGCGAAC CCCGCCACAG
GAAAGCAACT CCTCGACCAG CTCATTGCCA GCGGTATGAG TTCGGCAACT AGTGTGTCTA
GCCAAGCCCC TTCTCAGGCC ACGGGAGGCA ACGGCGGAGG AGATTCTTGG CCAACTGGGG
CTACCGTTGG CATTGTGCTT GTTGCAATTG TTGCCATTGC ATCGATTGTA GCGGCCGTCT
TGTTCAAGAA GCGCGAGAAA AAGGCCCTCT TTGACTTGGA AAAGGCCAAT AAAGGGCAAT
CGGCCTAG
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| Protein sequence | MTTRGRRESK DSPPPQGLTK SKLKTNPSSS TPFLASLILL KHDLQVTLSY QGVNTIAADC
THGRLFVSDM DSANVYTYEI DGTSNPVLLN TLPTVTGMGP QFLYTSSTEG AVTVVYRGLE
ETAYQDGAIS FIRVGVTPSS HEVAGFSVEK EDPSLVDDFF VSCARPIHHV AHDQKIAIFC
DGSFEDSVNS TVWVVDERFF GQGNKTLVFS KTLEGSHHGV AVPVDEDHIL VSVPTPERVA
NDPNASALPD GFHVYDYDMN LLHGLNEEED PSRSCAGFHG SGVIDNTFVF ACDQDHGGIL
VVDYGQAGVT YTSRALSYPD GFDAHRTGTL TEHRDSNAIV GNFADRATGD SKLVSFVPKQ
QSDEITEGQL LPLESGQCSF SFEQSGGNLI LAWMPTGNLQ VYAIEPEWML LADIQVIDDM
SSCDGTSMAP GQGHAYIMQG TSLIDVDLHD LTSPEISSID LGFMPASAVV AGVPAGYACE
APSFPETSST SAVDGWISIE QVLAPAGSTE STEFLRSFRN DIARSLGVGL NRVFVEETVK
ESDSSTVVHV KMSDPTEHDA NPATGKQLLD QLIASGMSSA TSVSSQAPSQ ATGGNGGGDS
WPTGATVGIV LVAIVAIASI VAAVLFKKRE KKALFDLEKA NKGQSA
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