| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_44331 |
|---|
| Symbol | |
|---|
| ID | 7198027 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011672 |
|---|
| Strand | - |
|---|
| Start bp | 253654 |
|---|
| End bp | 254823 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002178461 |
|---|
| Protein GI | 219115331 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TGAGTTGGCA GGACAACCTC ACCGAACGTC TCCCCCCCCG CCTTCCTTTC CATCGGAGGG
TATCTTCTCC GTACGCCTCT CGGCATGTAT CGTTGGGGCA TTCGTGTTTT TTTTTCCTTT
TCTTCCACAC ACACACTCAC TCACTCACAC ACGGACCCGT GAGCGTCACA CACACACACA
CATCACCGAG CATGACGAAC TTGTCCCACA CCGACCCGAC TACCGTCGTC CATACCAGTA
GCCATAGCTT TATTGAATCG ACCAAGTATC GTCCGCGCGA ACGACTGCTA CGTGAACACC
CGTCGGCGTC CGCCAACGAC ATGGCGCGTT CCGCCGGTTC CGTACGCACC GACCCACACC
CCACGGAACA CGCCCCCCTG GCCGTGGTTG GCTCACCCCA CCGCACCGGG AGATGGACGT
TGGACGAAAA GATACTTTTC CTGTACGGCT TGCGCAAATT TGGCAAGGGC AAGTGGAAAA
AGATGAGCGC GTATCTGCCG AATCGGTACG TGAACTTTTA AGCGTGTATC GTATACACAC
ACACACACAC ACACACACAC ACTCCTACGT CTCCATGCGG ATGGATGCTC CGGACGCGTA
CTTCTATAAC AGCGGGATAG TCCACGACGT TGCTTTTGTA CGATCGATCA CCTTGAAACG
CTCACTCATA CGATGCTCAT TGTTTCTGTT GTTTTTCCAT TTCCCGTGTC CCACCGACAC
AGGTCTCTGG TGCAAATCAA GTCCCACGCC CAAAAAGTGC TCAAGCGCAT CGATCAAGGC
GAACACGTCT TCCGACGTAT CGAGGAGAAC AACGCACGGC TCGAGCTTTT GGTGGCGAGT
ATTCACGATC GACTGGGCCA CGAAGCTCCC GCACTATTGT TGCCTAAAAC TGCTGCGGCC
AATAAGAGGC CACGCCGCAG CGTCGTCTCA CCCAAGGTCG ACCCTCCCAT TCCTGCCGTG
GAACTCGACG CGCAGCAGCA CATTATTGCC GCCTCGGCTC TGTGTCAACT CGCGGCTCCC
ACTGGACCCG GTGCCTGGGA TACCCCCACC ACGTGTCCTC CCGGTAGTAC TGGATCCAGT
CCCGTACTGC ATCCGGACCA CACCACACCC TCGCAAACAT GGATTCCTCC GTCGGACTCG
CAAACCGACT TGTCTGTCCA AGGCGTCTGA
|
|---|
| Protein sequence | MTNLSHTDPT TVVHTSSHSF IESTKYRPRE RLLREHPSAS ANDMARSAGS VRTDPHPTEH
APLAVVGSPH RTGRWTLDEK ILFLYGLRKF GKGKWKKMSA YLPNRSLVQI KSHAQKVLKR
IDQGEHVFRR IEENNARLEL LVASIHDRLG HEAPALLLPK TAAANKRPRR SVVSPKVDPP
IPAVELDAQQ HIIAASALCQ LAAPTGPGAW DTPTTCPPGS TGSSPVLHPD HTTPSQTWIP
PSDSQTDLSV QGV
|
|---|
| |