Gene PHATRDRAFT_44326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_44326 
Symbol 
ID7198024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp244809 
End bp246490 
Gene Length1682 bp 
Protein Length448 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178191 
Protein GI219114791 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.524343 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTTTGATACA ATCGTGGCAA CGGCCGCCCA GTCGCACGTA GTTCGCAGCT CCATCATAGT 
CACAACCTCG CACCGTTCGA TGTGAGAAAA ACACATAGCA ACTTTCGTGC TTTTTGGAAT
TTCCGATCCT TGTCTCCAAC TTACAAAGTG CAACGAGATT ACATGCCAAC CACAACCCAT
TTGGCTTGCT GTTTCTCCCT TCTTTAGCAG GCAAAAGCAA ACATGTGCCG CTTGGAGGAC
AACAATCCGG GCAATCCACA GCTATCGTAT TTACCCGTAT TGGACAGCAG CTCTTCCTCG
ATGAAAACCA GCTTTTCACT CTCCAAACGC TTCATGCGGC GGCCGAGTCG CTCTCCGTCT
CCGGTCAAAT ATCGAAGAAT ACATCGCGAT GTGATCTTGA TGATTGCGGT ACTGCTATTA
ATCTCAGTAC GATCTCTGTT TTGTTTTTTG TCTTTCAAGT CAGAGAAAGT CTCTATCTTA
GTCACAAGAA CCGTAGATTC AGAGTCCAGT ACAGTGCTGC GGTCGAATGG AATGTGTGAA
TCACACGAAG CGAAGTTTTC ACAAACGCCC AACCCTGTGT ATACGGAATT AACCCAATTT
TTGAGTGGAC CTGTCGAGCC TTCGACGTCC GAAGCCATAT GTGTCTTTAC TGATGATAAA
ATATCCGCGC ATTTCCCCCA TGCTATGCAA CAACTCTACG CTTGCTGGTC TTATTGGCAG
CATTACAAGG ATAAACGTCC CGTCTTGAAT GTGCGCCTTG ACACTAACGA ATCTTTGCTG
CAACGTGTGC AGCATTTTGT TTACCGCCGA CGCAGCAGGG ACAAACCTTT TCTTTCTACT
TTTTGGAGAC TACTGGAAGA CGTTTTCCAG GTAGAAATTC GGCACAACTC CCCAGAGACA
GTCGAAGGAG TTAGCGCCAG CGTTCCCGAT CGCTGGAGCA ACGTCGCTGC GAGCGAGCGT
ATGTCGGATG GTTACGCGAT GCTTTCTGGC GCAGGCCATG CTGCAGCCTT ACGTGATGGC
CTTTTGGAGA CCACATCGTG TCCGTCGCAA GTCCGTATCG GCTTGCTAAA CCGCAAACAA
AACCGGTCAC TGCTGAACAT TGTTGAGCTT CAGGATGCTA TCCAGCTCCG TTTTCCTGGA
AGCTCAATTG CTTTGGATTA CTTTGAAGGC AAAACATTTG GGGAGCAAAT CCAATTCTTC
GGATCGGTGG ATATTTTGGT TTCACCCCAC GGAGCCCAAC TAACGGGCAT TCCATTTATG
CCAACTTGTG GCCAGGTTTT GGAAATATTT CCGGAAGGAT ATCTCATCCC AACTTTTTTT
GGCTCGCTCG CCGAGGCGTC TGACCTTGGC CACGCATACA TGTATCTCGG CGATTCCAAT
CAATCATTGG AAGAAGTTCA AAGCCGTATG ATGGAAGATC GCAAGCAGCG GAGCCGCATG
CGACAGGCCA ACCTGTGCCC AGTGTCGGAT CAGGTCGCGG ATTCAGTTGA GCAACTGATG
GAACAGTGGC AAAACTGCTG CCATCAATAC GGCATGGCAC ACAAAGGAAA TCTTGCAATA
TACCGCTAAA GAAAACTGTG ATAAAGTTCT GTCCACAAGA GTTAAAGGGG GTCCACTGGT
CTTCCGTGGT GTACAAACAA ATTTATAATG TGTACTATAA GAAAACTTCG TCAACTTCCG
TG
 
Protein sequence
MCRLEDNNPG NPQLSYLPVL DSSSSSMKTS FSLSKRFMRR PSRSPSPVKY RRIHRDVILM 
IAVLLLISVR SLFCFLSFKS EKVSILVTRT VDSESSTVLR SNGMCESHEA KFSQTPNPVY
TELTQFLSGP VEPSTSEAIC VFTDDKISAH FPHAMQQLYA CWSYWQHYKD KRPVLNVRLD
TNESLLQRVQ HFVYRRRSRD KPFLSTFWRL LEDVFQVEIR HNSPETVEGV SASVPDRWSN
VAASERMSDG YAMLSGAGHA AALRDGLLET TSCPSQVRIG LLNRKQNRSL LNIVELQDAI
QLRFPGSSIA LDYFEGKTFG EQIQFFGSVD ILVSPHGAQL TGIPFMPTCG QVLEIFPEGY
LIPTFFGSLA EASDLGHAYM YLGDSNQSLE EVQSRMMEDR KQRSRMRQAN LCPVSDQVAD
SVEQLMEQWQ NCCHQYGMAH KGNLAIYR