Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_44326 |
Symbol | |
ID | 7198024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011672 |
Strand | + |
Start bp | 244809 |
End bp | 246490 |
Gene Length | 1682 bp |
Protein Length | 448 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178191 |
Protein GI | 219114791 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.524343 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTTTGATACA ATCGTGGCAA CGGCCGCCCA GTCGCACGTA GTTCGCAGCT CCATCATAGT CACAACCTCG CACCGTTCGA TGTGAGAAAA ACACATAGCA ACTTTCGTGC TTTTTGGAAT TTCCGATCCT TGTCTCCAAC TTACAAAGTG CAACGAGATT ACATGCCAAC CACAACCCAT TTGGCTTGCT GTTTCTCCCT TCTTTAGCAG GCAAAAGCAA ACATGTGCCG CTTGGAGGAC AACAATCCGG GCAATCCACA GCTATCGTAT TTACCCGTAT TGGACAGCAG CTCTTCCTCG ATGAAAACCA GCTTTTCACT CTCCAAACGC TTCATGCGGC GGCCGAGTCG CTCTCCGTCT CCGGTCAAAT ATCGAAGAAT ACATCGCGAT GTGATCTTGA TGATTGCGGT ACTGCTATTA ATCTCAGTAC GATCTCTGTT TTGTTTTTTG TCTTTCAAGT CAGAGAAAGT CTCTATCTTA GTCACAAGAA CCGTAGATTC AGAGTCCAGT ACAGTGCTGC GGTCGAATGG AATGTGTGAA TCACACGAAG CGAAGTTTTC ACAAACGCCC AACCCTGTGT ATACGGAATT AACCCAATTT TTGAGTGGAC CTGTCGAGCC TTCGACGTCC GAAGCCATAT GTGTCTTTAC TGATGATAAA ATATCCGCGC ATTTCCCCCA TGCTATGCAA CAACTCTACG CTTGCTGGTC TTATTGGCAG CATTACAAGG ATAAACGTCC CGTCTTGAAT GTGCGCCTTG ACACTAACGA ATCTTTGCTG CAACGTGTGC AGCATTTTGT TTACCGCCGA CGCAGCAGGG ACAAACCTTT TCTTTCTACT TTTTGGAGAC TACTGGAAGA CGTTTTCCAG GTAGAAATTC GGCACAACTC CCCAGAGACA GTCGAAGGAG TTAGCGCCAG CGTTCCCGAT CGCTGGAGCA ACGTCGCTGC GAGCGAGCGT ATGTCGGATG GTTACGCGAT GCTTTCTGGC GCAGGCCATG CTGCAGCCTT ACGTGATGGC CTTTTGGAGA CCACATCGTG TCCGTCGCAA GTCCGTATCG GCTTGCTAAA CCGCAAACAA AACCGGTCAC TGCTGAACAT TGTTGAGCTT CAGGATGCTA TCCAGCTCCG TTTTCCTGGA AGCTCAATTG CTTTGGATTA CTTTGAAGGC AAAACATTTG GGGAGCAAAT CCAATTCTTC GGATCGGTGG ATATTTTGGT TTCACCCCAC GGAGCCCAAC TAACGGGCAT TCCATTTATG CCAACTTGTG GCCAGGTTTT GGAAATATTT CCGGAAGGAT ATCTCATCCC AACTTTTTTT GGCTCGCTCG CCGAGGCGTC TGACCTTGGC CACGCATACA TGTATCTCGG CGATTCCAAT CAATCATTGG AAGAAGTTCA AAGCCGTATG ATGGAAGATC GCAAGCAGCG GAGCCGCATG CGACAGGCCA ACCTGTGCCC AGTGTCGGAT CAGGTCGCGG ATTCAGTTGA GCAACTGATG GAACAGTGGC AAAACTGCTG CCATCAATAC GGCATGGCAC ACAAAGGAAA TCTTGCAATA TACCGCTAAA GAAAACTGTG ATAAAGTTCT GTCCACAAGA GTTAAAGGGG GTCCACTGGT CTTCCGTGGT GTACAAACAA ATTTATAATG TGTACTATAA GAAAACTTCG TCAACTTCCG TG
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Protein sequence | MCRLEDNNPG NPQLSYLPVL DSSSSSMKTS FSLSKRFMRR PSRSPSPVKY RRIHRDVILM IAVLLLISVR SLFCFLSFKS EKVSILVTRT VDSESSTVLR SNGMCESHEA KFSQTPNPVY TELTQFLSGP VEPSTSEAIC VFTDDKISAH FPHAMQQLYA CWSYWQHYKD KRPVLNVRLD TNESLLQRVQ HFVYRRRSRD KPFLSTFWRL LEDVFQVEIR HNSPETVEGV SASVPDRWSN VAASERMSDG YAMLSGAGHA AALRDGLLET TSCPSQVRIG LLNRKQNRSL LNIVELQDAI QLRFPGSSIA LDYFEGKTFG EQIQFFGSVD ILVSPHGAQL TGIPFMPTCG QVLEIFPEGY LIPTFFGSLA EASDLGHAYM YLGDSNQSLE EVQSRMMEDR KQRSRMRQAN LCPVSDQVAD SVEQLMEQWQ NCCHQYGMAH KGNLAIYR
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