Gene PHATRDRAFT_44318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_44318 
Symbol 
ID7197975 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp216327 
End bp217499 
Gene Length1173 bp 
Protein Length150 aa 
Translation table 
GC content45% 
IMG OID 
Productn-terminal histone linker H1 
Protein accessionXP_002178183 
Protein GI219114775 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GAGAAAACGA ACATGACGAC GATTGTATTG ATTAAAGAGG CTATTGCCAC GCTTAAGGAC 
CGCACCGGAT CTTCGGTAGT CGCCATCAAC AAGTGGATTG AATCTGAGAA GAAGGTAAGC
CAAATCGATC TGTGCGAAAA GTTATCGCCG ACCAGAGACA GCTGGGTTCG GTCGAAACCG
ACGTTTTTTT GGTTCTTCGG GACATCCTCT TTTTTAAGAG TTACTGTTGA AACCAAAAGT
TGCCCTACAT CCGTATTCCC TACACCGATC GACACAGTGT ATCCAAGGGG ACGGTATACG
TGTGATTTGT TTCTCCATTT GTTCCCGCGG TTGCGATACG GATCTGTTTA GTTTGTACAT
GGATTCTACG ATGTTTTTGT AGGAGGAAGT TGTGACCTCA GATTTCTTGG GATCTAGGTT
CCGCAAGAGT ACAAAAGATG TACAGATCTC TCTGAAATCC TATATTGAAT AAGCTCACCA
AGTTTCGTCC GAATTCATTG CGCAGGAGCC CGTCAAAAAG CACATTTTGA AAGCAGCATT
GAAGCGGGGC GTAGAAACTG GTACCCTCGT GCAGGTAAAG AACTCCTACA AGGTTAGTCC
GCAGGAAAAG GCGAAAAAGA AGCCGGCAGT CAAAAAGGCA GCCCCCGCAA AGAAAACAGC
GGTCACGAGT AAGGTAAGTT GGAAGGAAGC GCTGTTGTGG GATCACTTCG TGGCCACTTT
AACTCACGTC GCTGTTATAC GACTGTGGAA CTAGACTACC GCACCAAAGG TACGAATGTT
TGGACCTACG CTATTTGTTA CTTCCCATTG TTCTATCTAG CAACTCACAA TTGACCTTAT
TTCTTCCTGT GCAGAAAAAG CCCCCTACCA AGAAGGCGAC GACAGCAAAG AAGACAACAA
CGGTCAAGGC CAAGGCAACT GCATCCAAAC CGGCGAAGAA GACATCTTCC AAGAAGGATA
CCAAGGCGAA AAAACCTGCA GCCAAAAAAG TAAGCAAGAA GAAGGAAGTC GAGAAGCAGT
AAAGAAAGTG GATTGGATTG TTATGTTACC ATTATCATGG AGGGTGTAAT CGTGATTTGG
GTTTTGCCGG TGGTTGCACG TGGAGGCAGT TCTAGGTGTC TACAAACACA ATGTGACTAA
ATTATTAAGT GAGTTAAACC AAAGTATATC TCT
 
Protein sequence
MTTIVLIKEA IATLKDRTGS SVVAINKWIE SEKKEPVKKH ILKAALKRGV ETGTLVQVKN 
SYKVSPQEKA KKKPAVKKAA PAKKTAVTSK TTAPKKKPPT KKATTAKKTT TVKAKATASK
PAKKTSSKKD TKAKKPAAKK VSKKKEVEKQ