Gene PHATRDRAFT_44313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_44313 
Symbol 
ID7198014 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp208193 
End bp209089 
Gene Length897 bp 
Protein Length203 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178450 
Protein GI219115309 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATATTTACTT GTCGTCTTAC ACACCTCAAG GGTTTCATTT CTATCGCTGT CGTATCCACT 
CGCTATGATG TCCGGACTTT TACAGAAATC AATCATTGCG ACGATCGCGT TGTATTCAAC
GTACCTTACG ACGGCCTTTT CGCTGTCGGC ACCGACTCTC GCGCGCCCGC AATCGTCGAC
TGTTTTGTCC ATGGCAACCG ATGGTGGCGA TCAGGATTTT ATGCGGTGGG CTCGAGCTTC
CCGTTCCGCA CAATCCGAAG ATAATGTGGT CGAACTACTC CGTCCGCTCG GTCTGGTTCT
AAATGAAGAT GAGCAGGGGA ACGTGTACGT GGAAACCGTC GCACCAAAAG GCAACGCCGC
ACGAGCCGGC AAGGTAAGTC TTCGTTTAAA GGAAACCTCG AATGTATCGA TTGCGATCAG
GTGGAGTCAC TAGAAACAGC CGGACTCACA CAACAAGTTT ATCACGTAAA ACTGCTTTCT
CTTTTTGTTA ATTGCAGATC AAAGAAGGTG ACATTGTCAC AATGTGCAGC GCGACTTTCG
GCGACGACAT GTGGAGTACA CGAGGCGTCG GTCTCACCCG TGTCTTGGCC GCCATTCGGG
TCCGGGCAGG AGCCAAGGTG AAGCTGGTGG TGGAAAGTCC GGCCAAAGCC AAAAAGAAGC
GGACGGAAAC AACAAAACAG ATCCAAGTTC GGGAAGAAGC CCAAAAGGCG GCACAGCGGA
AAAAAGACTC GTTGCTGGCC GAGTTGGAAC AGGATGAGAA AAAGTTGAAA AAAGGGGGCA
AATTCTTTGG CTTGTTTTAA GCTATGTCTG GTCGAATTCA AGTTGCGATC AAACTCCAAG
GAATACTAAG AAGAAATTTA ACAAAACGCT AACAGTAATA GTAACTGTAT TACAAAG
 
Protein sequence
MMSGLLQKSI IATIALYSTY LTTAFSLSAP TLARPQSSTV LSMATDGGDQ DFMRWARASR 
SAQSEDNVVE LLRPLGLVLN EDEQGNVYVE TVAPKGNAAR AGKIKEGDIV TMCSATFGDD
MWSTRGVGLT RVLAAIRVRA GAKVKLVVES PAKAKKKRTE TTKQIQVREE AQKAAQRKKD
SLLAELEQDE KKLKKGGKFF GLF