| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_44306 |
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| Symbol | |
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| ID | 7197968 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011672 |
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| Strand | - |
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| Start bp | 177970 |
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| End bp | 180768 |
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| Gene Length | 2799 bp |
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| Protein Length | 865 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002178446 |
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| Protein GI | 219115301 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.677805 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TCCGTAACGG AGACATTTTC TTCACTACAC GCACACGAGC ATTCCAAAGC TTCTTGTACG
GGCTCGCCTT CGAGAAATTC AATACTGATG CTATGAGAAG GCTTTCTGTC ATCGTCTCTC
TGTTTTTCAA AGTAGTTCTT TCGAGATTTG GATCCACCCT CGCATTCCTT GGTCGCACTC
GCTTTTTCGG TCATGACCGA ACTATCGTCT CCCAAAGTTT TCAGTGGTAT TCACCGTCGT
GCATTAGCGT CGAGCGCAGA ATGCTGCAAT CGTTGACGCT CTTCAGTGCA ACGGGCTTAT
CTCAACATGT TTCTGTTGGA GATTTTGTTG GAAGTGGATC ATACGGTACA GTCCACCTCC
TCGATGTCGA TGGTGCGACG GTCGTTGGAA AACGCGCGTG GACTAGGGGA GAGCTGCAAG
AGCAGCACCC GACTTTTAGA GAAAAAGACT TGTATGAGAA GGAGGGCCGC TGCCGCTCCT
ACTGGAGAAC GGAAGAGCAC TGTTTTAAAA AACTTGGAAG CTTTAAGGGT ATTCCAAATT
TCCGTGGGTC GCGTATGGAC TCGGAAAAAA GGAACTGGAT GTTATTTGAT CCTATACTAT
CATCCAAATC CAGCAGACCA GCGTCATCCT TACTCGAAAT TATGGCGCAA GACAGGCTCA
CCTATCAAAA TGACAAGGAA AATCATCTTT CCCTTCTTTC AAAACATTTA GTCGTATCAA
CAAAGAGGGA GAAAGTAGCA TCTCTAACTG AGACTTTGGA TATCGTGCTG GAACAGCTTT
TGGAGGTGCT GTGTTTTGTG CATTCGAACA AGGTTGTTCA CCGTGACATC AAACCTGGAA
ACTTGCTTGT GGCATCGGGT CGTCTGATTC TCCTGGATTT TGGGTCTGCA GCTGACATGG
AAACCGCTGG CTTGCTGAAA AGTAATATTG GACTAAGCGA GACTGTTGCT GTGAGCCCAA
TATACGCGGC CCCCGAACTT TTTGTTGATC CTAATCGTGA TCCTGAAAAG TTTGACTGCT
TCAGTGTAGC ACTATTGTTT TGCCAGTTGC TTTTTCAGTA TCTGGATGAG CGCATAGATG
CAGGATTTCG TCAGCAGTTG GAAAAGGCCA ATTTTAATTT AGATGCGTGG CTACAAACCG
AACTACAAGG TAAAGTTCGC CCATCTGGTT TAGAAGATGC GCTTGAGATT TTAGAGGAAC
GCCCTGGTCT TTGGAACCTA CTGCAGGCCA TGCTTCATCA AGATCCTGTG TTTCGCCTCT
CAAGCCAGGA CGCTCTAAAT CAATGGCACA GAGTAAAGGA TAGACAAGTT CTGCGTGATG
TTGACGGCTC TTACTTGATG GAGGTCTTGG AATCCCTCGA TCTTTGCATT ATCCCACCTT
CAAGACCTCT GCACTTTGTG GCAACGTTCG ACCGAAATGA GCCCTTAGGC CTGTTGCTTG
CAGAATCCGA CACGGACTCC AGCAAAATAG AAAATATTGT AGACGCCAAA AGATGGACCC
AGATAAAGGA AGATGCTATT TCCGGAGAAG TGTACGTCCA GGGGATTATA CATGATGGGC
AAGCCGAATC TATGGGAATC TTTGAAGTAG GAGATCGCTT ACAGGGTGTC GGTGAGCTCC
CATTAGCCGA AGGAGGATTC CAAAGGGCCA TTAATATGGT AGGTGGTATT TTCATGCTCT
TCTTGGTATC TCTGACAACA GTCTAATACC TACATATTCC TTTGACGAGA AGCTTCAGGA
TCAACCAAAG AAGGCCAAAT TTGTCACTTT GCATTTCGAT CGGAAAGCCA ACGTTGTTGG
ATCAAACGAT AATTTACCCA TTGCTTCAAT GGAGGGCCCC ATAATTGTAG CGGACCAAGG
AGCTTGGTCC CGTAGGGGGA AGAGATTCGC ACAGGAAGAT GCTTTCATTC TACACGAAGT
TCACGACACG AGAGAGCGGT CTGTGCTCCT AGCTGGTGTC ATGGACGGTC ATCTGGGAAC
GGCGGCATCC AAATTGGTGC AAGCAGAGCT TCCGATTCAC TTCTCCGACG AGCTTTTACG
ACACCTGGGC AAGAGCACAA GCGAAATGCT ATCGGCGGCG TGGGAAGCAA CGTCTCAATC
TTACTGGGCA AACTGTTTGT CTAGTGACGA ATGTGTTGCA GACTATGACC CAAGGGAAGG
ATTTTTGAAC GCAAATACGG GGTCAGAAGA TGCTGTTGCT GGGACTACAG CAGCGATTAT
GGCATTGGAC AAAAAGCTGG GTCACATAGC TGTGCTAAAT TGCGGTGACT CTCGAGGTGT
GATTCTGAAC TCACAGGGTC TTCCCATTTT CCAGACAATC GATCACAAGC CGGATATGGA
TATGGAAAGG CTGTCGGAAG GAAGGAAGCT GGGCAAGGAT TACAGTTTGC CTCAGTGTAG
GTTTTCTAAA TGGTTTCTGT TGGTGGGAGA ATATGAATAC GCTGTGAGCC GCTCCCTGGA
GGGACCTCTT GCAACCTCAA AGGGTATAGC CAATACTCCA GACATATCGG TGATTCAAGC
AGAAGCAGGA ATGTCCGGCT TAATTGCAAG TGATGGACTA TGGGAAGTCA TTGATACCGA
AGAGGTGTGC CTCATTTTGA CAAATTTGAG GGGCATGGGC AAAGGCGCAG GAGATGCAGC
AAAGACCATC TGCTCCATGG CCATCGAAAG GGGATCTTCG GATAATGTGA GCGTTGTTAT
ATTGTATCTA GAATAGCGGT TAATAGAGGC TGTTACTTTC GCCTCGGACG CAAGCAACTT
TATCGAGTTT AATCTAAATC CGGAGTTTTA AAAACATGT
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| Protein sequence | MRRLSVIVSL FFKVVLSRFG STLAFLGRTR FFGHDRTIVS QSFQWYSPSC ISVERRMLQS
LTLFSATGLS QHVSVGDFVG SGSYGTVHLL DVDGATVVGK RAWTRGELQE QHPTFREKDL
YEKEGRCRSY WRTEEHCFKK LGSFKGIPNF RGSRMDSEKR NWMLFDPILS SKSSRPASSL
LEIMAQDRLT YQNDKENHLS LLSKHLVVST KREKVASLTE TLDIVLEQLL EVLCFVHSNK
VVHRDIKPGN LLVASGRLIL LDFGSAADME TAGLLKSNIG LSETVAVSPI YAAPELFVDP
NRDPEKFDCF SVALLFCQLL FQYLDERIDA GFRQQLEKAN FNLDAWLQTE LQGKVRPSGL
EDALEILEER PGLWNLLQAM LHQDPVFRLS SQDALNQWHR VKDRQVLRDV DGSYLMEVLE
SLDLCIIPPS RPLHFVATFD RNEPLGLLLA ESDTDSSKIE NIVDAKRWTQ IKEDAISGEV
YVQGIIHDGQ AESMGIFEVG DRLQGVGELP LAEGGFQRAI NMKLQDQPKK AKFVTLHFDR
KANVVGSNDN LPIASMEGPI IVADQGAWSR RGKRFAQEDA FILHEVHDTR ERSVLLAGVM
DGHLGTAASK LVQAELPIHF SDELLRHLGK STSEMLSAAW EATSQSYWAN CLSSDECVAD
YDPREGFLNA NTGSEDAVAG TTAAIMALDK KLGHIAVLNC GDSRGVILNS QGLPIFQTID
HKPDMDMERL SEGRKLGKDY SLPQCRFSKW FLLVGEYEYA VSRSLEGPLA TSKGIANTPD
ISVIQAEAGM SGLIASDGLW EVIDTEEVCL ILTNLRGMGK GAGDAAKTIC SMAIERGSSD
NRLIEAVTFA SDASNFIEFN LNPEF
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