Gene PHATRDRAFT_44302 details

Gene Information

• Locus tag: PHATRDRAFT_44302
• ID: 7197965
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011672
• Strand: +
• Start bp: 166686
• End bp: 168777
• Gene Length: 2092 bp
• Protein Length: 538 aa
• GC content: 57%
• Product: predicted protein
• Protein accession: XP_002178177
• Protein GI: 219114763

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CGAACCCAAA AAGATTTCTC CTGCTCGAGT CATCATCGCG TGTGTTCTCT CACGATCGCC 
TCTTGGTGTG CGTTTGCGTT CGTGTCTTTT TCGTGTGTGT TCCCCACTGG AACTACGTAC 
AGTAACGCCT CGTCGTTTGC TATTATTCAC AGTCCGTTTG GTGTTTTGTT CATTTTCATT 
ACAGTAGTGG TACCTACTTT ACCTAGTGTG AGAGTGGAGG ATGATGATGT CCAAGCCGGA 
ACCGCAAGCC GCGGCAAAAA AGAAATCGGC AGGCGATGCC GTTGCGGATT TGGAACGCCG 
CCTCGCCCAA TTGGACGTTA CGGAAGCTCC ACCCGTTAGT ACCAGTACTG CTAGTGTCAC 
GAGTACGTTG GATGATCCTC CGGCCTTTGC GGCACCGCCG TCGGTGGACG AAGCCGTTCC 
CGTCAAGGGG GGCAAGAATG CTCTTTTGGT ACGTACATCC AACAACGATA GTTCGTATCC 
ACGAAACAGC CTCTGATGGG AAGCGACCGG ACTTGTTGGA CGCTGCGTCC AACAGTGATC 
GGTTTCACTG TCACTATCTG TTGGCATTCG TATGCTTTCC ATGCTTTTAC TTACTCGTTC 
GTTCACACGC TCGCTCTCTT TGTACTCAAC AACAATACTT CTACTACTGC TGCTCCTGTT 
ATTGTTACTA CGACAACAGG CTCGCATCAT GGCGGCACAA GAACGCGCAA AACAGGCTCA 
ATCCACGGTG AAAGCGCCGC CGCCTCCTCC CCCAGAGGAT TTGCTCGACC TCTCGGACGA 
CGTTCCGGCT CCCCCACCGT CCTTTCAATC GTACGAACAA ACCGCCGTTG CCGCACCGAC 
GCGGTCACCG CCAGCCCCGT CTTACAATTG GGATCCCCAC GCACCAACCC CCACCACCAC 
TAGTACGACT TCCGCTCCAC CCACGTGGAT TCCCGACACC TCCGCGCCTT CGGCTCCAGC 
CTTGGAAGAT CTGTTGGCCT TGGAACCCGC TACGCATTCG ACAAACGTGG GGACGGACGA 
TCACAATGCC TACTTTCTCG ATATGCAACC CGTCGCCCCA CCGTCCCAAG GTCACGCCGC 
GGAACCTTCG GTGGAAGAAG TCTTGGCGGC GCTCGAAGGT CTCACGGAAG AAGAAAAACA 
AGCCCTCCTG GCCGAACAGG CCAAGATCAT GGCGTCGATT GAGCATTCCC AAACATCCGC 
GGCGGCTGCC AAGGCTGACG CCTTTGAGAG TCGCAGTTTT TCCACGGCCG TTCAGAGCGT 
ACACCGTCGC CCGCAACAAC AACAACAACA ACAACAGCCA ACAAACGCCG CTCACCGCTC 
GGTTACCATT GACGGGCAGA GCGTTGCACT GCACGGACAG GAACAGACCC GGGCCGCTAT 
TCAGGACGGC ACCGCCGTAC TCGTACAGTG TCTTTCTTGC CAAAACATGA TGCAAGTGAC 
CAAGGCTGCT GCACTCATGT TCTGTCCCGT CTGTCAGGTA GTCTCGCCCG TAGAGCACCT 
GGATGGTATG GACGCCGCCC AAGCCGCACA GCTGCAGGCC GACATGGAAT TGGCCGAGCA 
ATTGCAAAAG GAGGAATACA AGGAAGCCGC GGCGGATCGA CAAGAGCGGA CTTCGCGACC 
AACGTCCACG CCGGACAAGA AAAAGGATCA ATCCTGGGGT GAGTGGTTGG GTTTGAGTGC 
CACGGCCGGT ACCACCAGCT CCACGTCTTC ACCGGAACGT CCCATGTCGT TCGCGCAAAA 
ACCAACCGAA CGGGGTGCCA TTGGAGTCGC GCGTCCCCCC GGTGCCGTCG CCGAAACCGG 
GACGGCCCAG TACGGATCCC GCTCGTACGA TGATGACGTT TGGGCGTCGC CGGGTGGCGG 
CGGTGCCCGG GTAGCGGAAA CGAAACCCTT GTTCAACTGC GTCGCCGATT CGGTCTACTC 
GGCTGCGTCG ACCTTCACCA CGGCCATGCA CGCCACCACG CTGTCCGAAG ACGACGAAGG 
CAACGTCCAC GGCGTTGACT CGTCGTCGCT CTTGGCCATG CCCGGTGTTT CGCGGGAATC 
GAATTACAAA CAGATGGATG GAAACTAACT GAAAAACGAA ATATAACTCT TT 

 

Protein sequence

MMMSKPEPQA AAKKKSAGDA VADLERRLAQ LDVTEAPPVS TSTASVTSTL DDPPAFAAPP 
SVDEAVPVKG GKNALLARIM AAQERAKQAQ STVKAPPPPP PEDLLDLSDD VPAPPPSFQS 
YEQTAVAAPT RSPPAPSYNW DPHAPTPTTT STTSAPPTWI PDTSAPSAPA LEDLLALEPA 
THSTNVGTDD HNAYFLDMQP VAPPSQGHAA EPSVEEVLAA LEGLTEEEKQ ALLAEQAKIM 
ASIEHSQTSA AAAKADAFES RSFSTAVQSV HRRPQQQQQQ QQPTNAAHRS VTIDGQSVAL 
HGQEQTRAAI QDGTAVLVQC LSCQNMMQVT KAAALMFCPV CQVVSPVEHL DGMDAAQAAQ 
LQADMELAEQ LQKEEYKEAA ADRQERTSRP TSTPDKKKDQ SWGEWLGLSA TAGTTSSTSS 
PERPMSFAQK PTERGAIGVA RPPGAVAETG TAQYGSRSYD DDVWASPGGG GARVAETKPL 
FNCVADSVYS AASTFTTAMH ATTLSEDDEG NVHGVDSSSL LAMPGVSRES NYKQMDGN