Gene PHATRDRAFT_44301 details

Gene Information

• Locus tag: PHATRDRAFT_44301
• ID: 7198010
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011672
• Strand: -
• Start bp: 163450
• End bp: 165835
• Gene Length: 2386 bp
• Protein Length: 540 aa
• GC content: 53%
• Product: predicted protein
• Protein accession: XP_002178442
• Protein GI: 219115293

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AATCGTTCGA GACATCCCCC TACACTGCCT CCGTATTTCA CAAGTCGAGA TACCTTCCCC 
CATCTCACAC CCCGCACCAA AGGAAAACGT TCCTCCCGAC ACTTTTTTTT CTTTTGGGGG 
AAGAACGGAA AAAACACTTT CCCATGGTAC GTTGTGTAAG GTATCTTGTG ATTGATGTTT 
TGACACGATC AAGGTCACAC ACGATCGATC AATTCAGAAC CACAATTCCT TCCACACCTT 
CGAAGAATCG GTTCGGGACG AACCGGAAGT AGTCCAACCT GTACTCCATT GGCCCCCTAA 
CGTCATTGAA ACAAATCGGC ATTGTTCTCT TCTCACATAT TTTCAATTAC AATTTCTTCT 
TCGTTTCATT GTTGCTCTTA TAAATCTTGC CACACAATGC TTGTCAACAT GAATCCCAAC 
AATCCTCCCG ATCTGTCCGC TCGGAATCCA ACCGTCCACA AACGCAATTA CCAATCGCTT 
TCGGACGATT ATTACGCACA ACTCTACGCC CATCAACAAC ACCGACTCCA CGCGTCGCAA 
CTACAATCCC AATTACAAAT GCAATTACTA CAATCCCAAC TACAACCAAC ACCTTTCCAC 
ACGGACCATT CTCCGTACGA TGCACTCCGT ACACCCGTGA TTCTCCACGA CGACCTCCTG 
CTCCAACGAT GTCCGAAGCA GAATTCCAAA CGCCAGCGCC GGCAAACGGC GGGGACCTTG 
CTTTCCAATT TGCTCAAAAC CAACAAACCA TCGACCGCGC AACCACGGCC GGAAATACAA 
ATCCCACCCC GGGGTATTGG TCCAGTCTAC GAACCCAATC GCAACGATGT CTTGTGCGGC 
CGTGGGGGAC GGATCAATGC GCATGCCGGG AACGTACAGT TTCGTGAACT CGTACTAGCC 
CGCAAGGTCG AGTACCTGCA CAAGAATACC AAAAAATTGG AAAAGGCGCA CATTGCCGCC 
GACGTCGTGC ACTCCATTCG ATGCATGGAT CCGGGAGGCC GCTTTCTGAA AGAGGACGCG 
GACGGAACGT GGTACGATAT CGGGGACGCC AAGGCCATCA AGAAAGTGGG ACAAGCCTTG 
CGGGAAGACG CTCCCGAAGT ACGAGAAGTT CTGGAGGAAA CTGAGGAAAA GGCTCCCGTC 
ACCGTCTCAA CGACTAACGG TACCGGCCAT ACTGCCGTGG GCATAGCCCA GGCCGAAAAT 
ACCAGGACGG CCACGACTCA CAGTCCCGGT AGTACCGTGC CGGTTCGAGG AGGTGCCAGG 
GCCGGGGTGA GCCCGCCTCG GCCACAACAA ACACTCTCGA ACGGGAACAG CACGAGGAAT 
GATCCCCATC GACCAATTGC TGTTCAGGCA CTTGATTCCG CCGCCTCGCA ATATCCTCGA 
CAGATCATGC CACCACCGGC GCTGGTCACC AGTGGTCCTA ACTCGCAAAA TCGATTGAAT 
CTAGGTTTGC GTGGAATGAT GCCCAAGACG GCCGCTTCTT CGGCTGCAAC TGCCGCTATT 
GTCCAAGACT CGGACGTTGC CTTTGGGCGT ACTTTCCATC CCGCCGACTC CGGTGGCAGC 
AGCATGATCT CGGGACTTTC GGGACCCACG AATATATCCG GCATGTCGGG CATTTCTGCC 
TTGACCGACC CAATTAGCGC CTTATCGTCC GGTACCGCTA CGGGACACGG GACCGGCAAC 
ACTCACGCGT CACACGAAGC CTTGCGGACG TCGCAACTGC TGGCCATGCG GCAGCAGTGG 
GCCGCGCAGC GTGCGGCCAG CACCGGTACG GATGTTTCGA AATTTCGCGA TTCGACTGGT 
TTGGGAAATT CGCTCAATCA GCCGCTGCAT TCGGCGTCGG ACCTGCTCGC TTCGGACAGC 
ATGAGTTGGG CGGAAAACTC ATTGACGGGT GGTGGCATTC GGGATAGTGC TTCCCACGTT 
TCGGGTATGA GTTTAGCGGC CTATTCGGCC GCTTTGCAAC AAGATCAGGT TCAGCAGCAC 
TTCGAATCGC TATTGCCTAC GTCGGAAGGA CGCGTGGGTG GTGGCGGGGC CTCGACCGGT 
AGTTCTAGCA AAGACACTAC GAGCAGTAAA TCGACCAATC GCATGGGAAC TTCGGGAACC 
TACCACCCCC ACCAACTACA CCAGCCACGA GTATCTTCGA GTGGTGTATC GATTGCGAGT 
ATGAGCGTGG CGTCCAACGC AGGAATGGAA TCATTGCCAT CGGTGGAAGC TGGTAGCGTC 
ATGTCCGATA TTTCGGAAAG TTTGTTGGCT CTGGAGTTGG CCGAAACAAA TATGTTGGGG 
GACTTTGAGG GGATGGAATA GAAGCTGTAG TTAGATCTCG ACCTTTCCCA AACGAAGGTA 
TGGACTACTA CAGTCATGTA ATTTGTAAAC GTTTGCGTTA AAATGT 

 

Protein sequence

MNSKRQRRQT AGTLLSNLLK TNKPSTAQPR PEIQIPPRGI GPVYEPNRND VLCGRGGRIN 
AHAGNVQFRE LVLARKVEYL HKNTKKLEKA HIAADVVHSI RCMDPGGRFL KEDADGTWYD 
IGDAKAIKKV GQALREDAPE VREVLEETEE KAPVTVSTTN GTGHTAVGIA QAENTRTATT 
HSPGSTVPVR GGARAGVSPP RPQQTLSNGN STRNDPHRPI AVQALDSAAS QYPRQIMPPP 
ALVTSGPNSQ NRLNLGLRGM MPKTAASSAA TAAIVQDSDV AFGRTFHPAD SGGSSMISGL 
SGPTNISGMS GISALTDPIS ALSSGTATGH GTGNTHASHE ALRTSQLLAM RQQWAAQRAA 
STGTDVSKFR DSTGLGNSLN QPLHSASDLL ASDSMSWAEN SLTGGGIRDS ASHVSGMSLA 
AYSAALQQDQ VQQHFESLLP TSEGRVGGGG ASTGSSSKDT TSSKSTNRMG TSGTYHPHQL 
HQPRVSSSGV SIASMSVASN AGMESLPSVE AGSVMSDISE SLLALELAET NMLGDFEGME