| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_44300 |
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| Symbol | |
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| ID | 7197962 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011672 |
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| Strand | - |
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| Start bp | 157355 |
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| End bp | 159294 |
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| Gene Length | 1940 bp |
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| Protein Length | 603 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002178440 |
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| Protein GI | 219115289 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACTTT CGTTAAACAT TACGATAGCC GTTGGAGACA ACAGTTTTTC TACCAGGTCA
GTTTCCCACA ACGGTCCCGA TCCCCGGTGG GGCAAGGGAA GGTCAGAGGG TTTTTCTTCA
CGAATCCGTC TCGTTGGCGA CTCCCATCAT TCGGTGTTTG CTTCAACCCA TTTCTCGTTG
AACAAGCATA CCTCGTACCC GCCCAGAACC GCGCCGCATC TTATTGCCAA CCTCCTTATA
TTTTACCGGG GTACACTGCG GTGTTGTTTG TTTACAGTAA ACTCGTTCGA ATTTGGAGCT
GCTTCGGTGC GGACCGGAAG GCTCGGCACT TTTCCTTTGG GCCATTGGCA CGTCACGATC
ATGAAAGTCA AGTCAAGAAA GTATCGTCAA GGAAAAACGC CAGCTACATT ACTAGCACTG
GCTGCTTCGA TGATTGCCAT TTCGGGCCGT GTTATTCTTA CGAGTACGAG AATGCCCACG
ATGGACTACG ACGGAAGCGG GGAAACGCGT GTACTGCTAC GGAAGGAACC AACGCAAGGG
CCAATGGCGC CATCGCAGCG TCGGAATCTG TCGACATTAG CCGTTGCTGC GCCGGCTGAA
AACCACAGCA CAAAAACTAC CGAGACTAGT TTGTGCAACA CGCAAAGCCG GATTTCTTCC
GCCGTTGACC CGGGCGATGA ATCGTTTTCG GATCCGATGG CACAGCAGGC CACAGACAGC
ACGTTCTCGG CCTGTATTCT CTTCATGGAC GATAACCCTC GTCTTGTGGA ATGGATGGCG
TACCACTACT ACGCATTGAA CCTTCGCGAA GTTGTCGTTG CCGTCGATCG TCGGAGTAAG
ACGAGTCCCT GGGACTCTCT GAGGAGGTGG ACTCCCTACA TGAACATTAC TGTCTGGAAC
GACGCCGACT ACGGCTATGT TGTCGACGAC GACATTGCAA TCAAGGGATC GGTTGCCCAA
AAGACAGATG CACACAGAGA CCGACAGCGA TTCTTCTACA GACAATGCAC CAATCACTTG
AAGCGTCGAC ACCGTACATG GACGGCTTTT TACGATGTGG ACGAGTACAT GACCATCGAC
GAACGCTTGG TAACGAATGC CGAAGAACGA ATGGCCAAAC CAGGTAGCGT ATTGCAGATG
ATCCAAGAGG TGCAGAAACG AGATCCAGTT CCGTTCGGTT GGAGAAGGAA TTGCGTCCTG
ATCCCCCGAC GGCATTTTTC GGCCGCGCCG AGCCATCCCG AAGAAGTGAG CAAGCTTGTT
CCATCTGTCG TAAACGCAGA CCAGCTGGAA ACACTGCGGT GGAGGTATCG CACTGAAGGG
GGGACGGACG GCTATCCCAA GTCAATAGTG GACGTGTCAA AGATTACGGT TAAAGAAACA
ACGAAGTTTG ACATTCACAG GGTCGTCAGC GATGCGTGTC CCAAGCCAAG GGCCGGTCAC
ACATTCCTTA CCATTCATCA CTATTTGGGC GACTGGAATC TATAGTAAGT GAAGCGCGTT
TGTATCACAG CAAAGCGGGA AACGTATCAC GTGTCCTAGA CCATGCCGAT ATTGCCGTTG
CTTTTATGTG ATTGGTTCTC ACCCATGTTC AACACAATTC TTCTGGCCTC AGCTCGTACC
GAGACGACGC CCGAAAAGGA GCCAGGAGAA GTAGACATGT GTGGGAGCTT CGAGCATTTC
GAACCGAGGG TGGGACTACT GACCAAATCC GACCATGGAT CAGCGGTTTT GTAGCAGCCA
TGGGAGAGGA TCGAGCTTCG TTGCTCTTGA AAGATGCTGG CGTTCTGGCC ATTTTGAATG
TCACCAACGA TGAAGATTCG AAATGGGATG TTGAAATTGG TCAGCTTATG GACGATCTTC
CCAAGAAGGA TCGTGATTTC CTTCAGCGTC TTCACACACG TTTCAATGTG TCCAAATCCG
TCGTCTCTTC GGTCAAATGA
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| Protein sequence | MPLSLNITIA VGDNSFSTRS VSHNGPDPRW GKGRSEGFSS RIRLVGDSHH SVFASTHFSL
NKHTSYPPRT APHLIANLLI FYRGTLRCCL FTVNSFEFGA ASVRTGRLGT FPLGHWHVTI
MKVKSRKYRQ GKTPATLLAL AASMIAISGR VILTSTRMPT MDYDGSGETR VLLRKEPTQG
PMAPSQRRNL STLAVAAPAE NHSTKTTETS LCNTQSRISS AVDPGDESFS DPMAQQATDS
TFSACILFMD DNPRLVEWMA YHYYALNLRE VVVAVDRRSK TSPWDSLRRW TPYMNITVWN
DADYGYVVDD DIAIKGSVAQ KTDAHRDRQR FFYRQCTNHL KRRHRTWTAF YDVDEYMTID
ERLVTNAEER MAKPGSVLQM IQEVQKRDPV PFGWRRNCVL IPRRHFSAAP SHPEEVSKLV
PSVVNADQLE TLRWRYRTEG GTDGYPKSIV DVSKITVKET TKFDIHRVVS DACPKPRAGH
TFLTIHHYLG DWNLYSYRDD ARKGARRSRH VWELRAFRTE GGTTDQIRPW ISGFVAAMGE
DRASLLLKDA GVLAILNVTN DEDSKWDVEI GQLMDDLPKK DRDFLQRLHT RFNVSKSVVS
SVK
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