Gene PHATRDRAFT_44263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_44263 
Symbol 
ID7197990 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp44334 
End bp48067 
Gene Length3734 bp 
Protein Length1017 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178157 
Protein GI219114723 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.243046 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAACAC CCGTCGGTAG CAGCAACAAC ATCGCAGAAG ATGCTCATTT TACATGCGAT 
ACCAAGCCGA GAGCCGTAAG AAACGCGAAG ACGACCCACC CTGACGGAGA CTTTGCCCAG
CCAGACCATA CCGACGATGT AGCGGAGCCT TCTCCGCCTC CAGCTTCGCT TCGCACAACC
TCGGTCGTCA GAGCGCTACC TACTATACCA CACGGTCAGG CTCGCACAGC GCTGGCGTCC
AAGCTCCGTG CCGTGAGTGT CGCTGCGGAA AGTACTCCGG AGCCGGCGCC AGTCCAGGTA
CCGAGCACGT CGGCGTCAAA GGTCAAGACT CGCACAGCGC CAGCGTCCGA GCCCGGTGCC
GTGAGTGTCG CTGCGGTAAG TGTACCGGAA CCAGTGCCAG TCCGCGTGCC AGACGCGTCG
TCGTCCAACG TCAAGACTCG CACAGCGCCA GCGTCCAAGC CCGGTGCCGT GAGTGTCGCT
GCGGAAAGTA CTCCGGAACC AGCGCCAGTC CAGCGTGCCA GACGCGTCGG CGTCAAACGT
CAAGACTCGC ACAGCGCCAG CGTCCAAGCC CGGTGCCGTG AGTGTCGCTG CGGAAAATAC
TCCGGAGCCG GAGCCGAGCC AGTCCAGTTA CCGAACGCGT CGGCGTGCAA CGTCAAGACT
CGCACAGCGC CAGCATCCAA GCCCGGTGCT GTGAATGCCA CCGCGGCAAA AAGACCAGTC
CGTGCCAAGC GCGTCGACGT CAGAAATCAC GTCTAGTAAA ACGCCAACGT TCAAGCCTGG
GGCCGTGAGT ATCACTACGG CAAGTGTTCC GGAGCCGGCG CCAGTCCAGA TGCCAAACGT
GTCGGCGTCT GACTTCGACA CTCGCACAGC GCCGGCGTCC AAGCCCAGAA CCGTGAGTGT
CATCAATGCT GATGCTGCCA AATCCTCTAA TATTGTAGTA GCAACAATGG AGGGTAGTTC
CATTGCCAAC AAACCAAGTG ATAGAGAATC CGCCAAAGGG AGGGCTTTGA ATCCTGGTGC
AAGCGCTGCC ACAGCCAAGA GTCACTTCGC CACGAAAGGC TATTTGTGCT CAGTCCCTCC
AAGCAATGAC AGCTTAAGAG CAACGGCGGA TTTCTCCGCT GGCAAAAATA TTGCTAAGAA
TACTGCGGTG TCTGGTCATG CAGTGGAGAA GAATCTAGCT TTTCGAGAAG CGACAATCCA
GAGAAATACA CATTCATTGT CTGGTCAAGA TGCTCTTGTG GTAGCAAATG CATCTGACGC
CCCGGTATCT GAAGTGCAAG CTGTTGAACC AGGGCATACA AAATCTGTGG CCAATCAAAC
TATGAAAAAT ATGCAAACCA AGCTTGAGGA AATGGAAGTG CAACATTTGA ACAACAGGAG
CGCTCACGAA GACGGAAACA GCAAGAATGA CAAAGGGGAA TCTTCACCTT TCTCGGAAGC
GGGCCTTTCG GCTATGCATC ACAGTCACAA CTTGAGGCAT CTCACAGAAC TGTTTCCGGT
GGAAACTAAA GGGGACCGCG GAATTGCAAA CTCTCCAGAC GGTATGTCTG GACTTGCCGC
TACTGGCGAC GAAAATTTGG CTATTGCTAT TGCTGTAGAA GACGTGGAGG AAAAAGGTAC
TCTAGTAGCA GCTTTTGAAT ATGATCCAGA CGCCAAGCCA ACCATCTTCA AAAATCGGAG
GTTCCAAATG TACACAATTC TGGGTTGCCT GTTTGCCATT GGTGCTATTG TGACTGGCAT
TATTGTATCA ACCACCAACG CTGGTGAAGA TGAAACGGTC TTTGTAACTC TGTCACCAAC
TATAACTCCG ACAATGGCTC CCACCACGCT TATCTTCAAC GAGCTTCGCA ACGAGTTTGC
CAAACAAATC GGACCTCAGG CACTTTCATC AGAGGAGTCA TATGAATCGG TTGCAAAATG
GATCACAGAA GAAGATCCGC TGCAAGTTAC ACCGGATGAT TCCAATTTTT TGCAGCGGTA
TATTTTAGCA TTATTCTGGT TTCAAACAAC AAACAATGGA ATGGACCCCT GGTTGTCCTG
CAATCGTCCA GTTGGTGAAG AGGATGAGAC TTGTATGTTT TTGAATTTTA CAACCATTGA
CGACAACTTC GAAATTGCAT ACAAAGAAGA ATCCGCAGTT AGATGGCTGT CAGGAACCAA
TGAATGTAGA TGGCCAGGCA TTTTCTGTCA CGAGGGCAGC GTAGTCAGTA TCCGCTTGGC
TGGCTGCAGC TTAAATGGGC CAATTCCTGT GGAGCTGCAA TTTCTCAACG TTTTGAATTA
CTTGGGATTG CATTACAACC TTCTGACAGG AGTTATCCCA TCGGAGGTAG CAGGACTCAA
AAACCTGATT GCCCTTGAAT TGCAAGGTAT GGAACGGAAA GGAGACATCA TTGAGAGTCA
ATCGATTTTC TATTCACATA AGTCCTCTCA TTTTGAACAG GAAACCTGCT TGAAGGTCAG
ATTCCTGCTG ACCTTTTTAC CTCAGATATT CTGTTGGTTA TGAACCTTGG AGACAACCTT
TTTGCTGGTA CAATACCAGA CTCCATTGGG AGTATGTCGT CCATTCAAGG ACTTTTCATG
TACGGAAATG ATTTTCAAGG CCAATTGCCA GACTCATTGG GCAATCTCTC GAACCTTCAG
TTTACAAGAT GGCAGAGAAA CCGGTTCAGT GGCTCAACAC TCCCAACAAC AATAGGAAAG
CTAACAGATC TCGAGGAGCT ATGGATGTTT TCCTGTGACA TGGGAGGAAA AATTCCGACA
GAGATTGGGG ACATGACCGA AATTCAAAAC ATCCGGGTAC GTTATTGCTG TTTGCGTCAA
CATTTCTCCC AATTGATGGA TTGACTGAAA AGGCTCACAC ATATATTGCT TTTAATGAAG
ATGATGAACA ATTTATTTAC TGGCCTAGTC CCGCCTGGAA TTGGCGGACT GACCAAGTTG
ACAAGTTTGG AATTGCAAGA AAACAGATTG AGCGGTCCAC TGCCTGATGA AATTTACAAC
TTGACCGCCC TGACGGCATT TGCCCTGTTT CGAAACGAAT TTACGGGAAC AATCAGTCCG
CTCATTGCAA GCATGCAACA GTTGCAATTC CTTGTGATTC ATACTAACCA ATTTACAGGC
CCAATTCCAA ATGAGATTGC GTTGCTGCGG AACCTTGTAA CCGTGTGGAT ATACTTCAAT
CAGTTCTCAG GGGCTGTACC GCTTGATCTT TGTGAATTAC GAGGCCCAAG CGGTCTGCAG
TTTCTGAATG CAGACTGTCG GCCAGTTGGA AGTCCGTCAA ATGACTGCTT CTGCTGTACG
GCATGTTGCA ATCGCGAAAA TGGCGCATGC TTTGTTACCT AGATGAAAGT CGCAACGGCA
CAACTAGGTA GGTCATCTTG GGCTCAAAAG AAGAAAAATT GCATTTGCAT ACAAGATGGC
AGAGTTAAAA AGTACTTTGA TATGCGTCCC ATTCTGTTCA AGATTTCTCA AGTGCTAATT
CCGTTTAAGA AAATCTTCTC TTTACAGCAA CCTCTAACAA TGTTGATTTC CTCTAACTTG
TAAAATGCGT CCATTCTAAC CCTGTTGGAT CACTAAAATG CATTTTACGT CCGTCTGTTT
GCCATTTGAC GTCTGCCGTT GTCTAGAAAA GAAAATTGCA TGCGCAGGAA TCTTTTGGGA
TCCACGGTAG TTTCTTTCTT TTCTAACCAA GGATGTTGCA AAGCTTCTTT TACGTTAATC
GGATGCTTGG GTCC
 
Protein sequence
MPTPVGSSNN IAEDAHFTCD TKPRAVRNAK TTHPDGDFAQ PDHTDDVAEP SPPPASLRTT 
SVVRALPTIP HGQARTALAS KLRAVSVAAE STPEPAPVQV PSTSASKVKT RTAPASEPGA
VSVAAVSVPE PVPVRVPDAS SSNVKTRTAP ASKPGAVSVA AESTPEPAPV QRARRVGVKR
QDSHSASVQA RCRECRCGKY SGAGAEPVHK TPTFKPGAVS ITTASVPEPA PVQMPNVSAS
DFDTRTAPAS KPRTVSVINA DAAKSSNIVV ATMEGSSIAN KPSDRESAKG RALNPGASAA
TAKSHFATKG YLCSVPPSND SLRATADFSA GKNIAKNTAV SGHAVEKNLA FREATIQRNT
HSLSGQDALV VANASDAPVS EVQAVEPGHT KSVANQTMKN MQTKLEEMEV QHLNNRSAHE
DGNSKNDKGE SSPFSEAGLS AMHHSHNLRH LTELFPVETK GDRGIANSPD GMSGLAATGD
ENLAIAIAVE DVEEKGTLVA AFEYDPDAKP TIFKNRRFQM YTILGCLFAI GAIVTGIIVS
TTNAGEDETV FVTLSPTITP TMAPTTLIFN ELRNEFAKQI GPQALSSEES YESVAKWITE
EDPLQVTPDD SNFLQRYILA LFWFQTTNNG MDPWLSCNRP VGEEDETCMF LNFTTIDDNF
EIAYKEESAV RWLSGTNECR WPGIFCHEGS VVSIRLAGCS LNGPIPVELQ FLNVLNYLGL
HYNLLTGVIP SEVAGLKNLI ALELQGNLLE GQIPADLFTS DILLVMNLGD NLFAGTIPDS
IGSMSSIQGL FMYGNDFQGQ LPDSLGNLSN LQFTRWQRNR FSGSTLPTTI GKLTDLEELW
MFSCDMGGKI PTEIGDMTEI QNIRMMNNLF TGLVPPGIGG LTKLTSLELQ ENRLSGPLPD
EIYNLTALTA FALFRNEFTG TISPLIASMQ QLQFLVIHTN QFTGPIPNEI ALLRNLVTVW
IYFNQFSGAV PLDLCELRGP SGLQFLNADC RPVGSPSNDC FCCTACCNRE NGACFVT