| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_44255 |
|---|
| Symbol | |
|---|
| ID | 7197938 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011672 |
|---|
| Strand | + |
|---|
| Start bp | 20551 |
|---|
| End bp | 22103 |
|---|
| Gene Length | 1553 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002178151 |
|---|
| Protein GI | 219114711 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CAACTAGCGA AACATCTGAG GGTGTGGTGC ATTCATTGAT TGTCAATGTC AATATCAGCT
CATACATATA CTCTACTTCA GGTATCTCTA GAGGACGCCT TTCAGCTGAC TGCTTAGGAG
CATGGCGTCC ATGCGTAGTG CTGTGCACCG GCACCATTTT TCTGCGTTGC TGCCACGCGT
GGACAGCGAT GGTGACGAGA CCAAGGAAGG TGATACGTCG AAACGGAGGC GCGGTAGTAG
TCTTTGCTCT CTTTACAACC ACAAAAACGT CCAGCGGAAT AGATTCGTTG TTGTTTTGTT
GGTGCTTATT CCACTGGCTT GCTATTACGT CTACGTACAC GCAACATCCA AACGAGCGCA
GCTTCTTGCA GCAGGTATTC CCAAAGTTCA TCCGTCCGTC CCACTCGATT TCATAGTCGC
CGGCTTTCCG AAGTGCGGTA CCACCACGCT ACTGTACGCG TTACACAAGC ATCCCGAAGT
TGCCATGTCA CCGATAGAAA ATTGTCAAAT TGCCCGACCC ATCCAGCAGG ATGACGTTAA
TTTGAAACGC CTGAACAAGG ACTTGCTCCA ATTGGACGCT ACGCCCGACG AGTCGAACGA
TATTATACTG AAGAAACGAG GCATCAAATG CCCAGATGCA CTCCACACCT ACAAGGTGAT
TCACCGACTG GCCCAACACT CGCCTTCTTG TAAGTTCGTC ATCGGCGTGC GACATCCCAT
ACAAATGCTT CAATCCTTTT ACAACTACCG CATCACCGAA ATTTACGATA AAAGTCTACC
GAAAGACAAC ATCCCGGATC TAGTCGATAT TCTGCAAGGG ACGGTTCCTA TTTGGAAGGA
TGTGTCTATT GACGTGGCGC GATTTGAACT CTATCTCCTG CAACTCGCCA AAACAGCGTT
GACCCTTGCT GATCTCGAAA CTTTGCAAGA ACACGATTGG TTGGCCGTCA AACCAAACAG
GTTCGACGTT TTTCTTTACA CGTTGGATCA AATAAATGAC GAAGATGTTT CACGGGCTGC
AGCTTTTCGC GGTGATTTGC AATCGTTTTT GGGCTTGTCT AATCCGTTGG AACCCCTCGG
ACACGAAAAT TTGAATCACT TTGTTGGTGG TCAAGCCCAT ACCGAGACGA TAGATATATG
CGAGCCGCAT TTTGACGGCG TCCGCGAGGC CTTATTGCGC AACAGTCAGG CGACGGCCGC
GTGGATTCGC ACCTTCATTG ACGCACCAAC CGTGACCGTT AGTAATCGCA ATCACGTTTT
GGAGACCTTG TCCGCCTGGG ATGTCGATCC CTGTAGTGTC GAAGAGACAA GATGACACCG
GGCGCTACCT ACTTTTTCTA AACAAGGTTA TCTAGAGCTT TGCTGCAAAG CACCCACATC
ATGCGTGCCA TCACACAATG CACGCCTTTC TCTCGTCCTT GGTTCCGCTA ATGCACTGTA
GTCTCTATTG CGGCCAATCA AGCCATTGGC TGTGTGGATG CTGGATGATC CTCGTGCTAC
TATTTCCTGG TAGAGTTTCA ACCAAATTGC GGCTTCGAGT AAATCAGAAT TCG
|
|---|
| Protein sequence | MASMRSAVHR HHFSALLPRV DSDGDETKEG DTSKRRRGSS LCSLYNHKNV QRNRFVVVLL
VLIPLACYYV YVHATSKRAQ LLAAGIPKVH PSVPLDFIVA GFPKCGTTTL LYALHKHPEV
AMSPIENCQI ARPIQQDDVN LKRLNKDLLQ LDATPDESND IILKKRGIKC PDALHTYKVI
HRLAQHSPSC KFVIGVRHPI QMLQSFYNYR ITEIYDKSLP KDNIPDLVDI LQGTVPIWKD
VSIDVARFEL YLLQLAKTAL TLADLETLQE HDWLAVKPNR FDVFLYTLDQ INDEDVSRAA
AFRGDLQSFL GLSNPLEPLG HENLNHFVGG QAHTETIDIC EPHFDGVREA LLRNSQATAA
WIRTFIDAPT VTVSNRNHVL ETLSAWDVDP CSVEETR
|
|---|
| |