Gene PHATRDRAFT_34180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_34180 
Symbol 
ID7197925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp1290262 
End bp1290633 
Gene Length372 bp 
Protein Length123 aa 
Translation table 
GC content54% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178679 
Protein GI219115767 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0233422 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGCAA TATGGTTAAG CGCAAACATC GCTCCAAATC CGGCGTCGGG CCTCCAAGGT 
TGTCAGCAAG TCCCGAATTG CCACCATCAA ATCATCCTCC GCTCAACCCA AAGCCTCAAA
TCCGCACGGT GGATACTCGG AATGGACCCG TCCCAATTTT ACTTTGGCCG CAGCCATACT
GACGGCAATG GTTTTGGAAA TGTCGGTAAC GCCAGTGTCA GCTTTCTCGA GGACCACAAC
AAGCAAGACT TGGTGGACAA GAACGCTCTC GAAATGGCCG TCTTCCGCCG ACTCCGATTG
GCGACCAACA CTTCCGGTGC GGGAATAATG GAAGAGGACG CCGCTTGGCG TCTGGAAGAG
ATTCTGACCT AG
 
Protein sequence
MTAIWLSANI APNPASGLQG CQQVPNCHHQ IILRSTQSLK SARWILGMDP SQFYFGRSHT 
DGNGFGNVGN ASVSFLEDHN KQDLVDKNAL EMAVFRRLRL ATNTSGAGIM EEDAAWRLEE
ILT