Gene PHATRDRAFT_34165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_34165 
SymbolhCDK3 
ID7197918 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp1250715 
End bp1251685 
Gene Length971 bp 
Protein Length295 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178395 
Protein GI219115199 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.936456 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGGCC AGGGCGCTTA CGGAATTGTT TTTAAGGGGA CAAAGATAGA TACGGGCGAA 
ACAATTGCCA TCAAACGAAT TGCTTTTGCG GATTCTACAC CGGAAGGTGG GGTACCCTGT
AACGTCATCC GTGAGATCAG CCTACTGCGA GAACTGGATC ACCCCAACGT AGTCAAGCTA
CTGGACATCA TTCAAGCGCG GCGCGGAGGA TTGTACCTCG TCTTTGAGCA TGTAGCATAC
GACTTGAAAA TGTACATGGA TCAGTGTCAA ACGTCCGATG ATATTTCGGA GCGCCAGGGT
TTACCTATTT CCACCGTACG CTCTTTCTTG CGACAAATCA TTGCCGGGGT ACGCAAAATG
CGAGCAGCTC TTTGAGATGT GATCCATGTT TTCCCTTCTG TGCCCTCACG ATGCTGTTCT
CGTCATTTCA GGTCGGATGC TGTCATACCT ACCGTATTTT GCACCGGGAT CTCAAGCCTC
ATAACCTCTT GATTACAGCG GACGGTAGGG ACGTCAAGTT GGCCGATTTT GGACTGGCGC
GCCTATCGGC AATCCCCAAC GGTCCGTACA CGTTCGAAGT CGTGACGCTC TGGTACCGAG
CCCCCGAGCT ACTTCTGGGG GCGAATCGCT ACTCGACGTC GATTGATGTT TGGAGCATTG
GTTGTATTTT TGCCGAAATG GCTACCGGAA TGCCTCTTTT CCCGGGACGC TCGGACATTG
ACCAACTTTT CAAGATCTTT CAACGTCGCG GCACGCCATC CGGAGATATG TGGCCGGCCG
TCACGCGGCT GCCGCACTAC AACGTGGAGT TTCCCATGTG GTCGGAGCGT CCCATCACGG
ACTTTTGCCC GGCACAGAAG TTGGGTGGTC CAGCCGGGGT TGATCTAATC AACAAGCTTT
TGGCGTACGA CCCGGAACGG CGAATTTCTT GCAAGATGGC GCTGCAACAC CCGTTCTTTC
TACAGGCCTA A
 
Protein sequence
MIGQGAYGIV FKGTKIDTGE TIAIKRIAFA DSTPEGGVPC NVIREISLLR ELDHPNVVKL 
LDIIQARRGG LYLVFEHVAY DLKMYMDQCQ TSDDISERQG LPISTVRSFL RQIIAGVGCC
HTYRILHRDL KPHNLLITAD GRDVKLADFG LARLSAIPNG PYTFEVVTLW YRAPELLLGA
NRYSTSIDVW SIGCIFAEMA TGMPLFPGRS DIDQLFKIFQ RRGTPSGDMW PAVTRLPHYN
VEFPMWSERP ITDFCPAQKL GGPAGVDLIN KLLAYDPERR ISCKMALQHP FFLQA