Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_34120 |
Symbol | |
ID | 7198128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011672 |
Strand | - |
Start bp | 1144558 |
End bp | 1145322 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | |
GC content | 59% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178649 |
Protein GI | 219115707 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.606027 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCACC GACTTGCTCT AGCGTCAGCT GCCCGCCTCC GCGTATCCCA CGCGCGTCTC TTTTCGAGCG CGGCTTCATC GGGTCTCGAT CGCGTTCAAA CCGTCGAAAA CTACGAACAC GTCCTGAACA CCTTTGCGCA GGTCCGTGCT TGCGCCGTTC TCCGGACCGC TACTTCGGAT GATTGCCCCA AGGCCATGCA AGCCGCCATT GACGGTGGTT TCCAGATCTG CGAGTTCACC CTCACGACTC CCAACTGTCT GCAGCATCTG GCCGATTTCC GTGCCAAGTA CGATGGCAAG GTCATGATTG GATGCGGGAC CATTCTGACG ATCGATGATG CTGCCGCTGC TGTCGACGCA GGCAGTGAGT TTATCATCAC TCCCGTCATG CTTCCCGACG TTATTGAGTG GTGCAAAGAG CGCAACATTG TCTCCGTGCC CGGATGCCAA ACGCCCACGG AACTCGTCAA CGCGTATCGT CACGGTGCTC CCTTGCAAAA GCTATTCCCC GGTGTCGCGG GTGGACCCGG TTGGGTCAAA GCCGTCTCGT CGGCGTTGCC CTTTTTGAGC ATCAACCCCA CGTCTGGGGT GGACCTCGAC AACGCCGGGG AGTTCCTTAA GAACGGAGCC GCCTCCGTGG GACTCGTCGC ACCCCTCTTT GATCCCGTCG CCGTCGCGAA TAAGGACTGG GACCAGATTG CTCAGAACGC CGCCAAGGTC ATGGCCAATG TGCGTGAAGT CGGACCCTAC CAGCGAAAGA AGTAA
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Protein sequence | MAHRLALASA ARLRVSHARL FSSAASSGLD RVQTVENYEH VLNTFAQVRA CAVLRTATSD DCPKAMQAAI DGGFQICEFT LTTPNCLQHL ADFRAKYDGK VMIGCGTILT IDDAAAAVDA GSEFIITPVM LPDVIEWCKE RNIVSVPGCQ TPTELVNAYR HGAPLQKLFP GVAGGPGWVK AVSSALPFLS INPTSGVDLD NAGEFLKNGA ASVGLVAPLF DPVAVANKDW DQIAQNAAKV MANVREVGPY QRKK
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