Gene PHATRDRAFT_34120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_34120 
Symbol 
ID7198128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp1144558 
End bp1145322 
Gene Length765 bp 
Protein Length254 aa 
Translation table 
GC content59% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178649 
Protein GI219115707 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.606027 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCACC GACTTGCTCT AGCGTCAGCT GCCCGCCTCC GCGTATCCCA CGCGCGTCTC 
TTTTCGAGCG CGGCTTCATC GGGTCTCGAT CGCGTTCAAA CCGTCGAAAA CTACGAACAC
GTCCTGAACA CCTTTGCGCA GGTCCGTGCT TGCGCCGTTC TCCGGACCGC TACTTCGGAT
GATTGCCCCA AGGCCATGCA AGCCGCCATT GACGGTGGTT TCCAGATCTG CGAGTTCACC
CTCACGACTC CCAACTGTCT GCAGCATCTG GCCGATTTCC GTGCCAAGTA CGATGGCAAG
GTCATGATTG GATGCGGGAC CATTCTGACG ATCGATGATG CTGCCGCTGC TGTCGACGCA
GGCAGTGAGT TTATCATCAC TCCCGTCATG CTTCCCGACG TTATTGAGTG GTGCAAAGAG
CGCAACATTG TCTCCGTGCC CGGATGCCAA ACGCCCACGG AACTCGTCAA CGCGTATCGT
CACGGTGCTC CCTTGCAAAA GCTATTCCCC GGTGTCGCGG GTGGACCCGG TTGGGTCAAA
GCCGTCTCGT CGGCGTTGCC CTTTTTGAGC ATCAACCCCA CGTCTGGGGT GGACCTCGAC
AACGCCGGGG AGTTCCTTAA GAACGGAGCC GCCTCCGTGG GACTCGTCGC ACCCCTCTTT
GATCCCGTCG CCGTCGCGAA TAAGGACTGG GACCAGATTG CTCAGAACGC CGCCAAGGTC
ATGGCCAATG TGCGTGAAGT CGGACCCTAC CAGCGAAAGA AGTAA
 
Protein sequence
MAHRLALASA ARLRVSHARL FSSAASSGLD RVQTVENYEH VLNTFAQVRA CAVLRTATSD 
DCPKAMQAAI DGGFQICEFT LTTPNCLQHL ADFRAKYDGK VMIGCGTILT IDDAAAAVDA
GSEFIITPVM LPDVIEWCKE RNIVSVPGCQ TPTELVNAYR HGAPLQKLFP GVAGGPGWVK
AVSSALPFLS INPTSGVDLD NAGEFLKNGA ASVGLVAPLF DPVAVANKDW DQIAQNAAKV
MANVREVGPY QRKK