Gene PHATRDRAFT_34119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_34119 
SymbolIscS 
ID7198127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp1142984 
End bp1144186 
Gene Length1203 bp 
Protein Length400 aa 
Translation table 
GC content52% 
IMG OID 
Productprecursor of desulfurase cysteine desulfurase IscS 
Protein accessionXP_002178373 
Protein GI219115155 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.275152 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTCCA CAACTCCTTT GGACCCCCGC GTACTGGACG CTATGGCGCC CTTCATGATT 
GGCAGCTACG GCAATCCTCA TTCGCGTACT CATCAGTTCG GCTGGGAAGC CGAAAGTGTG
GTAGAAAAGG CGCGTAAGCA GGTGGCGGAC TTGATTGGTG CGGACGCCAA GGAGATTATC
TTTACGAGTG GTGCCACGGA ATCAAACAAT TTAAGTATTA AGGGCGCCGC ACACTTTTAC
GCCAAGCGCG GGAAACACGT CATCACTACA CAGACAGAGC ACAAGTGTGT GTTGGATTCT
TGTCGTTCAC TGGAATTGGA AGGTTACGAT GTCACGTACT TGCCGGTGCA GCACGCTACG
GGGCGTGTGG ATATGGATCT CCTCAAGGCC ACGATTCGTG AGGACACGGT ATTGCTCTCC
GTCATGGCCG TCAACAACGA AATTGGTACC CTACAACCGC TGGAAGAGAT TGGGACCCTG
TGCCGTGACA ACAAGATTGT TTTCCACTGC GACGCGGCGC AGATGCTTGG CAAGATGCCG
CTTGACGTTG ACAAGTATAA GATTGATCTC ATGTCGATGA GTTCGCACAA AGTATATGGT
CCCAAGGGCA TCGGTGGTCT CTACATTCGC CGTCGTCCCC GTGTCCGCCT CGAACCGATG
ATGTCTGGTG GTGGCCAGGA ACGTGGATTG CGTTCGGGAA CTTTGTCCCA TTTTTTGTGC
GCCGGCTTTG GCGCCGCTTG TGAGATTGCC AACAAGGAAA TGGATTACGA TCACGAGTGG
ATCACGTACC TTTCTAAAAA GCTGCAGAAT GGAATTGAAG AACGAATTCC GGAGGTTGTC
CGCAACGGTG ATCCGGAACA CAACTATATC GGTTGTTTGA ATTATTCTTT TGCCTATGTC
GAAGGCGAAT CGTTGCTCAT GGCGCTCAAA AATATTGCCG TCTCGTCCGG GTCTGCGTGT
ACGTCAGCTT CGTTGGAACC GTCGTATGTG TTGCGTGCCT TGGGTGTAGA CGACGAACTC
GCCCACAGCA GCTTACGCTT TGGTCTCGGC CGCTTCACGA CGGAAGAAGA AGTGGACTTT
GTTTTGGAAT TGTTGGAAAA GCACGTATCG CGCTTGCGCG AAATGTCTCC ATTGTGGGAA
ATGGTACAAG AAGGCATCGA CCTTAAAACC ATCCAGTGGA CGCAGGATGC GCACCACCAT
TAA
 
Protein sequence
MSSTTPLDPR VLDAMAPFMI GSYGNPHSRT HQFGWEAESV VEKARKQVAD LIGADAKEII 
FTSGATESNN LSIKGAAHFY AKRGKHVITT QTEHKCVLDS CRSLELEGYD VTYLPVQHAT
GRVDMDLLKA TIREDTVLLS VMAVNNEIGT LQPLEEIGTL CRDNKIVFHC DAAQMLGKMP
LDVDKYKIDL MSMSSHKVYG PKGIGGLYIR RRPRVRLEPM MSGGGQERGL RSGTLSHFLC
AGFGAACEIA NKEMDYDHEW ITYLSKKLQN GIEERIPEVV RNGDPEHNYI GCLNYSFAYV
EGESLLMALK NIAVSSGSAC TSASLEPSYV LRALGVDDEL AHSSLRFGLG RFTTEEEVDF
VLELLEKHVS RLREMSPLWE MVQEGIDLKT IQWTQDAHHH