Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_34119 |
Symbol | IscS |
ID | 7198127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011672 |
Strand | + |
Start bp | 1142984 |
End bp | 1144186 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | precursor of desulfurase cysteine desulfurase IscS |
Protein accession | XP_002178373 |
Protein GI | 219115155 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.275152 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCTCCA CAACTCCTTT GGACCCCCGC GTACTGGACG CTATGGCGCC CTTCATGATT GGCAGCTACG GCAATCCTCA TTCGCGTACT CATCAGTTCG GCTGGGAAGC CGAAAGTGTG GTAGAAAAGG CGCGTAAGCA GGTGGCGGAC TTGATTGGTG CGGACGCCAA GGAGATTATC TTTACGAGTG GTGCCACGGA ATCAAACAAT TTAAGTATTA AGGGCGCCGC ACACTTTTAC GCCAAGCGCG GGAAACACGT CATCACTACA CAGACAGAGC ACAAGTGTGT GTTGGATTCT TGTCGTTCAC TGGAATTGGA AGGTTACGAT GTCACGTACT TGCCGGTGCA GCACGCTACG GGGCGTGTGG ATATGGATCT CCTCAAGGCC ACGATTCGTG AGGACACGGT ATTGCTCTCC GTCATGGCCG TCAACAACGA AATTGGTACC CTACAACCGC TGGAAGAGAT TGGGACCCTG TGCCGTGACA ACAAGATTGT TTTCCACTGC GACGCGGCGC AGATGCTTGG CAAGATGCCG CTTGACGTTG ACAAGTATAA GATTGATCTC ATGTCGATGA GTTCGCACAA AGTATATGGT CCCAAGGGCA TCGGTGGTCT CTACATTCGC CGTCGTCCCC GTGTCCGCCT CGAACCGATG ATGTCTGGTG GTGGCCAGGA ACGTGGATTG CGTTCGGGAA CTTTGTCCCA TTTTTTGTGC GCCGGCTTTG GCGCCGCTTG TGAGATTGCC AACAAGGAAA TGGATTACGA TCACGAGTGG ATCACGTACC TTTCTAAAAA GCTGCAGAAT GGAATTGAAG AACGAATTCC GGAGGTTGTC CGCAACGGTG ATCCGGAACA CAACTATATC GGTTGTTTGA ATTATTCTTT TGCCTATGTC GAAGGCGAAT CGTTGCTCAT GGCGCTCAAA AATATTGCCG TCTCGTCCGG GTCTGCGTGT ACGTCAGCTT CGTTGGAACC GTCGTATGTG TTGCGTGCCT TGGGTGTAGA CGACGAACTC GCCCACAGCA GCTTACGCTT TGGTCTCGGC CGCTTCACGA CGGAAGAAGA AGTGGACTTT GTTTTGGAAT TGTTGGAAAA GCACGTATCG CGCTTGCGCG AAATGTCTCC ATTGTGGGAA ATGGTACAAG AAGGCATCGA CCTTAAAACC ATCCAGTGGA CGCAGGATGC GCACCACCAT TAA
|
Protein sequence | MSSTTPLDPR VLDAMAPFMI GSYGNPHSRT HQFGWEAESV VEKARKQVAD LIGADAKEII FTSGATESNN LSIKGAAHFY AKRGKHVITT QTEHKCVLDS CRSLELEGYD VTYLPVQHAT GRVDMDLLKA TIREDTVLLS VMAVNNEIGT LQPLEEIGTL CRDNKIVFHC DAAQMLGKMP LDVDKYKIDL MSMSSHKVYG PKGIGGLYIR RRPRVRLEPM MSGGGQERGL RSGTLSHFLC AGFGAACEIA NKEMDYDHEW ITYLSKKLQN GIEERIPEVV RNGDPEHNYI GCLNYSFAYV EGESLLMALK NIAVSSGSAC TSASLEPSYV LRALGVDDEL AHSSLRFGLG RFTTEEEVDF VLELLEKHVS RLREMSPLWE MVQEGIDLKT IQWTQDAHHH
|
| |