Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_33916 |
Symbol | |
ID | 7197701 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011672 |
Strand | + |
Start bp | 661732 |
End bp | 662890 |
Gene Length | 1159 bp |
Protein Length | 319 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178273 |
Protein GI | 219114955 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.859586 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAAGG CTTCATCTCT CAAACGAGGA GTGTCGTCCC AAAGGGGCCT TCTGGCTTCG CTATGGTCGC TTGTAACAGT AATGACAGTA TTAGCTTTCA TAGTTGCTCT CATCTTTACA TTTGCTGGGG TACAAGAAGG CGACTCCTAT TCCAACCGAA ACCAGAATAC GAACGATCAA GACGCGAGCG ATCCAAAAGT GGCAGTGACG AGTCGAGGCA TGGCTGTAGC GGCTCTCTGG ACAGCTGTTC TGGCTACTCT AATCTCAATT TTCGGGACTG TCATTCTGGG ATGGCAGTCG CCCACAGGAC GGTATTACAG TTGCTGCTCC ACAAAGGTAC ACCAAACAAA CGCACTGTCC CTGGGCAGTT TCATCGGAAC CGTTTTTATG TTCGCGAATC TGACCTTCAT ATGTGCCATT CTGTTCGGAG AATTCGAGGT AATTTTCATC CGGGTAAAGA GCACTTTTTG ACTTTCCTTT GGACGTCTCT GACATATATT TTCTTCTTTC TGCCTTAGAT TCGTGACCGA TGCGGAGAAG GAGAAGGACG GAAACGAGAT GGCGTAGCAA CCGCTTCAGC GGTCGCACGG TCGTCGACGG CCTTCAGCAT AGCGTGCCTC TTCCTAACGC TCCTGTATGG GGGGTTCGTC TCCATTTTGT TTGTCTATTC CGAGAGCATT TTGGAGGAAC TGACAGCCGT CGAAAAGGAA GATTTGCACA ACGCAAGGTG TATCCATTCC GCATCGCCAA CTCCATTTGC AACCGCCTAC ACCGGCTACA TTGGAGAGCG ATTCGATGTA CGACGAAATC TAGGCAGTAG TGCTGCTGGC TTACTGTTAA TGACTCCTAA ACCGGCGAAC TGCTTATCCG ATGGTACGCT GACATAATGA CAATGATGGC AATCAATTCT CTACGTGTAG AGTGATGAAG ATACATGGGT CCTAGCGGGA GTACATGATG CTCTCTTGGC CCATTCTTAC CGAGACTTTT AGGTACACCG TTTTTGGCAG CTCAGTTTGT AGCAGCTCTA GATTCTTTGA ATTTGAATCC GCTTTCCACC ACGTTGTACT TGAATCCGAG TTGGAGTGTG ACCTACAACC ATCTCTCAGT CCCAGGCTAC TCTCAGCGCA ATGACTTTCA CAAGGAAATT GTTTCCTGA
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Protein sequence | MAKASSLKRG VSSQRGLLAS LWSLVTVMTV LAFIVALIFT FAGVQEGDSY SNRNQNTNDQ DASDPKVAVT SRGMAVAALW TAVLATLISI FGTVILGWQS PTGRYYSCCS TKVHQTNALS LGSFIGTVFM FANLTFICAI LFGEFEIRDR CGEGEGRKRD GVATASAVAR SSTAFSIACL FLTLLYGGFV SILFVYSESI LEELTAVEKE DLHNARCIHS ASPTPFATAY TGYIGERFDV RRNLGSSAAG LLLMTPKPAN CLSDGTPFLA AQFVAALDSL NLNPLSTTLY LNPSWSVTYN HLSVPGYSQR NDFHKEIVS
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