| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_33896 |
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| Symbol | |
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| ID | 7197692 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011672 |
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| Strand | - |
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| Start bp | 612404 |
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| End bp | 615204 |
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| Gene Length | 2801 bp |
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| Protein Length | 866 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002178543 |
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| Protein GI | 219115495 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGCAGC CGTCGTCGTC CCACAATTTT GATTTGTCCG ATACGTCCGC GTATCCAGTG
AGGTCGGCGT TCCCCGAGAG GTTTTCCAAG AACCACGTCG GGCCTTTCAT TGTTTCGGAG
CAAGGGTCGA CCTCTAACTA TCGCAAGTAC CAGCACTTCT AACACTTTTC AATTCACACA
CATCCCTTGC GTAACCGGAG GATACGGAAT CGTACAGGAC TGCTGATACA GGGCACCAGC
TTTTTACATT TGTGAGAAAA TGCCCAAAAT AGCTCCGAAA CGCCAATCCA AAGGTGAGCA
GTCGGGCAGT ACGGTGCAGC CCGTTGCCGT TGCAGACAGT GCAGAGGGTT TCCGGTATAT
CACAACGCAA GAGCGCGTCT TCTCACCAAA TCTTCCTTTG CTGTGTAGAT TTAAATTGCG
CGGACGACGC GTCGTCGGCA GGATCCTTGG ACGTTGGCGC TTGTTGTCTT TGTCATTGTG
CACTGGACTA CAGCGATCGC GCCGCTTTCT TTCGAGATGA TCGGCACGAA GATTATCACG
AAGACAGCGA TCAGGAGGAA TATTTCTTTC GAAAGAGCGA TCCCTATCTA CCGAACACCC
TCTACGATCC TTCTAATGCA CTCGTGTACT GTGATTCGTG CGATCGTATG TACCACCAGA
AGTGTCACTT TGTGCCCTTG ACCGTTGTCC CGCGAGGAAA GTGGGACTGT TTGGTGTGTC
AAACACAAAG GGAAAAAGCG AAAATCTCGC TCAAGAAAAA GAAACCGGCT ACCGGCAATG
ACCATTCAAA ACGAAAAACT CCTGCGACGA GCCAAGACCA CGCTATTCCT CGTCTATCGT
CGTCCTGTTT TCAGTCTCCT CCCAACCCGG GCGTGCGTGA GGAGGAAGTC GCTTGGGAAA
GCGCCTGTCG AGACGTCAAA GCGGCCCTAT GGAAAGCCGA GCTACACAAC CGTGTTCCAC
TCCAAGTCAA CTCGCAACTG GCCAACGTTC GTTTGGCCGA GACGGCGTTG GAAACCTTGA
CGAGCACGGC CAAGAATCGA TCGCATTTCG CACAAAATTC CCAAGAACTG GCACAGTGTA
TGGTGCGATT GTACGGGAGC CGGCGCAAGC TACGACATGT GCTGCTGAAC CTACAAGATC
TCATCCGCGG GGACCAGGAA ATGCGATGGA ACATGCTACT CCGCTTTTGT CGGGATGACG
CGTCCCCGGA ATTCGTAGCA CGAGTCGCCT TTCCGTTCGG AATGTCGCAC TCGCGACGAG
TTGATCCTCG TACTCCGGAA ATGACACTGA ACGCAGAAGA ACACGCATCC AATACAGTTC
CTGCCGAAAT TTCTCTTACC ATTAACAGCG AAACGCAGGC AAATTCTGAA CCGGCACAAT
CCATAACCGA CCAGTCGAAA CCCATAGCAA AGCATGATGG TGATAGTGGT ATTTCGTTGG
ACAATTTGCG CTGCTGCGTC TGTCACCAAA GTGAGGCTAC GGATGAAAAC GATATGATCA
TGTGCGATGG CTGTGGGTGC TATCGCGCGT ATCACATGCG GTGTCTTCAA CCACACGTCA
AGCCGGAAGA AGTCGAAAAC GAAGAAGACG ATTGGTTCTG TCCGCTTTGC AGCACCCTCG
CCGATATGAT GCTCTTAATC CAAACAAACC ATATGGGAGA CGAATGGGAG CAGCGACGCT
ACGCGGCGGA ACTGGATGGC GTAAAGAATG GGGATGACGA TTCATTGAAG TCGTGGAATG
CTGTTGAGGA AGTTTTTCCT GAAGTAGAAG TCAACTATGC AGCAGCATGC GATCTTAAAG
ATGGCAAACG AACAACTGCG GCATCCAAAC TTTTGGGGAG AATTCTTGGG TTGGAAGAAC
AGGAGATCGA CACAGATATT GACGATGACG AGGAGGATGA GGACGACGGT CACTTCGACC
TGGAATCTTT TCAAGAAAAG CGACATCAAG CTCGTGTAGA GTTATCTGGT GATAAGGAGG
ATGCTAGTGA AGGAAGCAGT CAAGCTACGC TAGAAGAGAT GTCCAGTGTG GAGCTGAATA
TCGGTAAAGA TGAGCTGGCG GCGCTTTCAG AGGTTTCGGA GGACGAGGAG GAAAGTGAAC
AAGAAGTTCA ACGACGAAGC GTCCGATTGC GAAAAAGTGG AAACACAAGC TCTGCAAACG
CAAGCGTTTC CGACCCGGGT AAGCTGGACG AGTCCAACAT TTTAAACGGG AAACGAGGGC
GGAAATCTGT GGACTACCAG AAACTGAACG ACGCTATATT TGGAGAATTG TCGGACGGTG
AAATTGCCAA GATTGATGAT ACTGACGATT TTCTAGTGGC AACATCCCGC AACCAAAACG
ATTCTAGCGA CTCTGGCGAT GCCAATGATG ATTCAACTGG AAGCAGCCAT GTAGGCGAAG
CAGATGAATT GAGCTTAGAC GACGAAAATG AAGATAGCGA ATCAGAAAAC ACAGAAAATG
GTATAAAAGA TAGGAGAGAT GATAGACGGG AGGACGATCA TCTTACCGTT AGATCTTCAA
GAGTAAATCG TCCATCAACA GTGCGACAAC TTCAATCAGC TTTGGCCGGC GAAGATGGTT
GTACATCCGT GATATTGAGC CGGAGCGAAA ACGTAAAGAA GCGTAAATTG AAGGAAACAG
CCATTCCTGA ATCTCAAACG AATGCACAAG GAGCGGGTGC AGAGACAGCG TCATCCGATG
AGGCCTCTAG AAGTCGGAAA AATAGGAGAG GCAAGTTTGC CAAGGCAGCA TTGACAATGG
TTTCGAAGCT TGTTCAAGTT GCACCAAGTT TAGAGAAGTA A
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| Protein sequence | MRQPSSSHNF DLSDTSAYPV RSAFPERFSK NHVGPFIVSE QGSTSNYRKA PAFYICEKMP
KIAPKRQSKD LNCADDASSA GSLDVGACCL CHCALDYSDR AAFFRDDRHE DYHEDSDQEE
YFFRKSDPYL PNTLYDPSNA LVYCDSCDRM YHQKCHFVPL TVVPRGKWDC LVCQTQREKA
KISLKKKKPA TGNDHSKRKT PATSQDHAIP RLSSSCFQSP PNPGVREEEV AWESACRDVK
AALWKAELHN RVPLQVNSQL ANVRLAETAL ETLTSTAKNR SHFAQNSQEL AQCMVRLYGS
RRKLRHVLLN LQDLIRGDQE MRWNMLLRFC RDDASPEFVA RVAFPFGMSH SRRVDPRTPE
MTLNAEEHAS NTVPAEISLT INSETQANSE PAQSITDQSK PIAKHDGDSG ISLDNLRCCV
CHQSEATDEN DMIMCDGCGC YRAYHMRCLQ PHVKPEEVEN EEDDWFCPLC STLADMMLLI
QTNHMGDEWE QRRYAAELDG VKNGDDDSLK SWNAVEEVFP EVEVNYAAAC DLKDGKRTTA
ASKLLGRILG LEEQEIDTDI DDDEEDEDDG HFDLESFQEK RHQARVELSG DKEDASEGSS
QATLEEMSSV ELNIGKDELA ALSEVSEDEE ESEQEVQRRS VRLRKSGNTS SANASVSDPG
KLDESNILNG KRGRKSVDYQ KLNDAIFGEL SDGEIAKIDD TDDFLVATSR NQNDSSDSGD
ANDDSTGSSH VGEADELSLD DENEDSESEN TENGIKDRRD DRREDDHLTV RSSRVNRPST
VRQLQSALAG EDGCTSVILS RSENVKKRKL KETAIPESQT NAQGAGAETA SSDEASRSRK
NRRGKFAKAA LTMVSKLVQV APSLEK
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