Gene PHATRDRAFT_33833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_33833 
Symbol 
ID7198062 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp459886 
End bp460874 
Gene Length989 bp 
Protein Length269 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178229 
Protein GI219114867 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.22985 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAGG CCAAAGTTAT CTGTGTGTCC GATTCCAACG ATTCGAGCTG GCAAGCCGTC 
TTCCGAAATC TTCCCGTGGA TACTGAAATC GTGGCTACCG GTACCGTTCT GAAAGATTTT
AATTTCGAAG AGCTGCGCTC AAAGGATGCC AACGTTGTGT TTGTGAGCTA CTTGGATGTC
AAAGATCTGT TATCGACTTT TCTCTCCGAG CTACCGAGTT TGGAATGGGT CCATTTTCGA
GCGGCCGGTA TTGACAGCGT GATGACGGAT ACTCTTAAGT CGTGGACGGG TACAATGACG
AATGCAAAGG GATCCTTCAG CGAAGCACTC GCAGAATACG CACTGACGGC ATGCTTGTAC
TTGTGAGTAT GGTTAGTATT CGTACAGAGA TTCGTGGTCA ATCTGCCTGT CGCATTGCTC
ACGGCTTTCA TCCTTTCTCG CACGACGAAG TGCCAAAGAT CTGCCACGCT TGTTGCGACA
AAAGGGTGTC AAACAATGGG AAAAGTACAC AGTCCGGGAA CTGAAGGGCG CTACGCTTGG
GATTATTGGG TAAGAGACGC CGGCCTCTGT AGATTCATCG CAAATGACCA TGAACGAAAA
GGCTCACCTC GATTTCACAT CTGCTTCAGA TTTGGTGACA TTGGAAGGTA AGTCTTTGAC
GTTCTGGGAT CACTTCGTGT TCTGTAGCCA AAAGAACTGC AGGCTAATGT CGTGTTTACA
GGGAATGTGC GAAACTAGCA TCCGCTTTCG GTATGAGAAT TATTGCCCTT CGTCGCAACC
CGAAACCCGA CTCACTGTGC GACGCTGTGT ATGGAAACGA CACCGCCAGC CTCAATCGAT
TGTTTGCCGA CTCGGACTAT ATATTGTGCG CTGCTCCGTT AACACCGCAA ACTCGAGGTA
TGATTGGAAA AGAACAGTTT GATCACACTA GAGAGAATGC CGTATTCATC ATTTGGGGCG
TGGTGCGGTT GCAGACGAAG ACGCCTTGA
 
Protein sequence
MSKAKVICVS DSNDSSWQAV FRNLPVDTEI VATGTVLKDF NFEELRSKDA NVVFVSYLDV 
KDLLSTFLSE LPSLEWVHFR AAGIDSVMTD TLKSWTGTMT NAKGSFSEAL AEYALTACLY
LDSWSICLSH CSRLSSFLAR RSAKDLPRLL RQKGVKQWEK YTVRELKGAT LGIIGFGDIG
RECAKLASAF GMRIIALRRN PKPDSLCDAV YGNDTASLNR LFADSDYILC AAPLTPQTRG
MIGKEQFDHT RENAVFIIWG VVRLQTKTP