Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_33833 |
Symbol | |
ID | 7198062 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011672 |
Strand | + |
Start bp | 459886 |
End bp | 460874 |
Gene Length | 989 bp |
Protein Length | 269 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178229 |
Protein GI | 219114867 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.22985 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAGG CCAAAGTTAT CTGTGTGTCC GATTCCAACG ATTCGAGCTG GCAAGCCGTC TTCCGAAATC TTCCCGTGGA TACTGAAATC GTGGCTACCG GTACCGTTCT GAAAGATTTT AATTTCGAAG AGCTGCGCTC AAAGGATGCC AACGTTGTGT TTGTGAGCTA CTTGGATGTC AAAGATCTGT TATCGACTTT TCTCTCCGAG CTACCGAGTT TGGAATGGGT CCATTTTCGA GCGGCCGGTA TTGACAGCGT GATGACGGAT ACTCTTAAGT CGTGGACGGG TACAATGACG AATGCAAAGG GATCCTTCAG CGAAGCACTC GCAGAATACG CACTGACGGC ATGCTTGTAC TTGTGAGTAT GGTTAGTATT CGTACAGAGA TTCGTGGTCA ATCTGCCTGT CGCATTGCTC ACGGCTTTCA TCCTTTCTCG CACGACGAAG TGCCAAAGAT CTGCCACGCT TGTTGCGACA AAAGGGTGTC AAACAATGGG AAAAGTACAC AGTCCGGGAA CTGAAGGGCG CTACGCTTGG GATTATTGGG TAAGAGACGC CGGCCTCTGT AGATTCATCG CAAATGACCA TGAACGAAAA GGCTCACCTC GATTTCACAT CTGCTTCAGA TTTGGTGACA TTGGAAGGTA AGTCTTTGAC GTTCTGGGAT CACTTCGTGT TCTGTAGCCA AAAGAACTGC AGGCTAATGT CGTGTTTACA GGGAATGTGC GAAACTAGCA TCCGCTTTCG GTATGAGAAT TATTGCCCTT CGTCGCAACC CGAAACCCGA CTCACTGTGC GACGCTGTGT ATGGAAACGA CACCGCCAGC CTCAATCGAT TGTTTGCCGA CTCGGACTAT ATATTGTGCG CTGCTCCGTT AACACCGCAA ACTCGAGGTA TGATTGGAAA AGAACAGTTT GATCACACTA GAGAGAATGC CGTATTCATC ATTTGGGGCG TGGTGCGGTT GCAGACGAAG ACGCCTTGA
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Protein sequence | MSKAKVICVS DSNDSSWQAV FRNLPVDTEI VATGTVLKDF NFEELRSKDA NVVFVSYLDV KDLLSTFLSE LPSLEWVHFR AAGIDSVMTD TLKSWTGTMT NAKGSFSEAL AEYALTACLY LDSWSICLSH CSRLSSFLAR RSAKDLPRLL RQKGVKQWEK YTVRELKGAT LGIIGFGDIG RECAKLASAF GMRIIALRRN PKPDSLCDAV YGNDTASLNR LFADSDYILC AAPLTPQTRG MIGKEQFDHT RENAVFIIWG VVRLQTKTP
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