Gene PHATRDRAFT_33768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_33768 
Symbol 
ID7198038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp309561 
End bp310391 
Gene Length831 bp 
Protein Length276 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178475 
Protein GI219115359 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGACCC GTCGCGTGTT GCCTTTACTA ATTGCCATGA TTGGACTTTA TCGTGGCTTG 
GCTGCTCCGC AGACAATTCA GGCATCCCGT CGGGCTTTCA CAAAAACTGG CAAAACTCTG
CGAGCGACCG TGGAAAACGG CAAAAACAAT GCCAAAACGG TGTCCCAGAA CCTCGCCGCC
AAAAATGCCA AACTGGAAGC CGCCGCCTCC AGTGGCAGCA TCTGGTCGAT TCCCAAGGAC
CATCCGTTCG CCTTTCAGCT GTTTGTGGCA ACCGCAAAGA CGGCGGCTGC CGATTTAATG
GTACAAATGG TGGCCGAAGG GAAGACTCTG TCGGAAGTAG ACTGGAAGCG CAACGGTATT
TTTGTCGTCT TTGGTTGCGC CTATCTGGGC GGCTTCCAGT GGTGGATCAT GGTAAACAAG
TACCGTCAGT GGTTCCCCAC TATGGATCGT TTTGCCAAGC TATCCTTTGC CGATAAACTC
AAGGACAAGG CCGGGATTCT GGATGCCGGG CGGATGGTAT TGTTTGATCT GTTTGTGCAT
TTGCCCTTTA TGTACTTCCC AACGTACTAC ACCGTCAAGG AATTTGTTGG TGGCAAAAGC
TGGAATCCGG CGGATTGGGT CAAGGACGGA GTAGGGAAAT ACGCCAACAA TATCCAGGAC
GATTTGGCGG CCATGGTCAA ACTTTGGGGA CCCAGTGACT GCATTCAATT TATTTTACCG
TTGCATCTGC GTATGCCCTT TCGTCACATT GTATCCTTCT TCTGGACCGC CTACGTTTCG
TTTACCCGTG GTGCAATTGA ACCGGCGGGC GTACCCTTAC CTACCAAATA G
 
Protein sequence
MKTRRVLPLL IAMIGLYRGL AAPQTIQASR RAFTKTGKTL RATVENGKNN AKTVSQNLAA 
KNAKLEAAAS SGSIWSIPKD HPFAFQLFVA TAKTAAADLM VQMVAEGKTL SEVDWKRNGI
FVVFGCAYLG GFQWWIMVNK YRQWFPTMDR FAKLSFADKL KDKAGILDAG RMVLFDLFVH
LPFMYFPTYY TVKEFVGGKS WNPADWVKDG VGKYANNIQD DLAAMVKLWG PSDCIQFILP
LHLRMPFRHI VSFFWTAYVS FTRGAIEPAG VPLPTK