| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_33730 |
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| Symbol | |
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| ID | 7198020 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011672 |
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| Strand | - |
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| Start bp | 227877 |
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| End bp | 229279 |
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| Gene Length | 1403 bp |
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| Protein Length | 402 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002178455 |
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| Protein GI | 219115319 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00194424 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACAA CTTTCCAAAT TTCAAGCCTT GGAATGGGTT TTCGTGTTGA TAATTCCATT
GGGCCTACTA AATCTTTCCC TATCCGTTGT GACAAGACTG ATATTCTCCC AATCCGTTGT
GACAAGATTG ATAGTACCAA AGAACCTATC ACGGTTACAT ACAGAGCTTT AACGTCCTAC
GAACGTTCTA GCCTTCCCGT TTACATTTCA AACAAGTCAT CGCCATATGA AACAGTCATT
GGCGATTCAG CTGCATCATA CAAACTCAAT CACGATTCTC AAACTAGTCA TAAATCTTAT
TAGTTCATCG ATTTCCATCA TTCGCGTTCT TGCGTTTGTA GAGCTCATCT ATATTTCGGT
CGCATCGAAA AAACATTTTG TGAGACAGTA AACCTTGAAA CGACACCTTT ACTCTAGCTA
ACTGACAGCG AAACTCATCG CAATCGTCGC TCGCTGTCAG CTTCGACGAG AAAATCGAAA
GAGTCGCGTA TGATATTTCG ACTCTACCAG GAAAAAGAAA CAGCCCGAAC ACAGACACAG
CTATGGGCGT CAGTCACGAC CAACAGATTC AACCGGAAGA AACCGAGGCT ATTCTATTGG
AGCGCATGCA AGAGATGCAG GTGGAACTGA GGCTACTGTC TCCCTATGAT CGAGATTGCC
TTGACTTGGC CATGCGCAAA TGCCCCGCTC TCGCCAGCGA CCGATCGTTT CAAGTTTCGT
TTTTGCGGAC GGAAGTGCTG GACGCCAAAC GTGCCGCGAA ACGGTACGCT ACATACTGGA
AGCATCGAGT GAACCTGTTT GGTCCGGTCC ATGCCTTTTT GCCATTGGTA ATCAAAGATG
AAGCAGACGT GATGGAGGCG ACGGAACAGG CACCGAACAG CGCCTTGACA ACCGAAGACA
TGCACGTTTT GAAGTACGGT TTTACTCGTG TCGTGGCTGG CCATGGACGT GTGCTGCTCA
TTGACCCTTC TCGGACGGGA CCAAAAAGTG ACTACAAAGT CGATAGTATT GTGCGTTGTC
TCTTCTATAC CGCCACTAAG GCCCTCCTAG CAGATGAAGA AATGCAACGC AAAGGCGGGA
TATTCATTCT CGATATGAAA GGCAGTATCC GAGGCTTCGA TCGAGCGTTG ATTAAACGCT
TGACGGAAAC AACCAACGAC GGCTTCCCTT TGCGCTGCTC CGCCTGTTGC ATTTTACGTC
CACCGCTACT GGTGGACACA TTTGTCAAAA TAGCCAAGGT CTTCTTGCGA TCCCGTGTCC
GCAATCGCAT TCACGTGGTC ACATCGGAGT CCAAATTGGA AAAGCACGTC GGTGTGTACT
CTATGGAAGC GCTGTTTGAA GCAGCAGACC ACAAAGCTTG GCTGAATCAA ATGCGTACTG
AGGATTTTAA GCAATATAGG TAG
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| Protein sequence | MNTTFQISSL GMGFRVDNSI GPTKSFPIRC DKTDILPIRC DKIDSTKEPI TVTYRALTSY
ERSSLPVYIS NKSSPYETRN SSQSSLAVSF DEKIERVAYD ISTLPGKRNS PNTDTAMGVS
HDQQIQPEET EAILLERMQE MQVELRLLSP YDRDCLDLAM RKCPALASDR SFQVSFLRTE
VLDAKRAAKR YATYWKHRVN LFGPVHAFLP LVIKDEADVM EATEQAPNSA LTTEDMHVLK
YGFTRVVAGH GRVLLIDPSR TGPKSDYKVD SIVRCLFYTA TKALLADEEM QRKGGIFILD
MKGSIRGFDR ALIKRLTETT NDGFPLRCSA CCILRPPLLV DTFVKIAKVF LRSRVRNRIH
VVTSESKLEK HVGVYSMEAL FEAADHKAWL NQMRTEDFKQ YR
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