| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_33729 |
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| Symbol | |
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| ID | 7197977 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011672 |
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| Strand | + |
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| Start bp | 224988 |
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| End bp | 227285 |
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| Gene Length | 2298 bp |
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| Protein Length | 679 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002178186 |
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| Protein GI | 219114781 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGTGA GGGATCCTAG ACTTAGAATT GGAGGGAAGG TGACGGCAAA GGCTTGTCAT
GTTGTGCATC TGAGCGAGTG CGCACGGAGA TATGGCGTCA ACAAGCACTC CAAGCGGCTT
GTTGGAACGG TTCTAGACGT CACGACCACC CCTGTATCCA TTACAACCGG GCGTACCTCT
ACTTTGATAA CAGCAGTTTA TGATTTTGGA GAGAGTTTGT TCAAGGAAAA AACACTGAAC
ATTCGGAGTG TAAAGGCATT TGTACCGCCA GAAGATGAAG GAATGTCCTT AATTGAGGAA
TTAGCAGCAG AGGCTTTGCA GGCAGCAGAA GCAGACATGG AAGGCGGAAA CTTGATGGAA
GAAAGTGTCG AAGCCCCGGT AGCCAAAATG GTTGAAACCC CGGCTGACAT AGAGCCCGAT
ACCTTGGTCG ACACAGAGCC CAATACCCCG GTTGACACAG AGCCCAATAG CCCGGTAGCC
GAAATTGTCG AGACCCCGGT TGACACTGAT ACCTCGGTTG ACACAGAGTC CGAAAACCCG
GTAGCCACAG TGCACCAAAC AGAGTGGTAT GTGAATGAAA GAAAAACCCG GCTGGATGTG
AATGGCCATG TCTATGTTAG GCACTTCCAT ATCCGTACTT CAGTTGGTGA CCTTATTGGT
CAAGATTCTG ACAATGGGGT GAGATTTTCG CGCCTCGAAT ATTTTCTGCT CATGTTTCCG
CCGACCCAGC TGACTACTAT GTGTCGGCTT ACAAATACTC AGCTTGCACA GCGAAACAAG
AATCCAATCA CAACCGGAGA ACTTCTTCGG TTCTTTGGAA TGCTCATACT CACTACAAAG
TTTGAGTTCA GTAGCCGGGC CCAACTATGG TCCACCACTG CACCCTCCAA GTACATTCCT
GCCCCTTCAT TTGGACGCAC AGGAATGTCC CGGCAACGGT TTGACGATAT CTGGAAATAT
ATCCATTGGA GTGAACAATG TCCAGTCTGA CCCGATGGTA TGAGCACTCA TGTTCACCGA
TGGCAACTTG TTGACGACTT TGTCACAAGG TTTAATGAGC ATCGTAGCAA AAACTTTGTA
CCTTCCCATC TGATTTGCGT GGATGAATCT ATCTCAAGAT GGTATGGGCA GGGTGGGGAT
TGGATAAACC ATGGTCTACC AAATTATATT GCAATTGATC GAAAGCCTGA GAATGGGTGC
GAGATTCAAA ACGCAGCGTG TGGACAATCC GGTATTATGC TTCGATTGAA ACTTGTAAAG
GGAAAGACGA TAACTGACGA CGAAGAGGGT GACGAGGAGG ATGAGTATCT ACCGCATGGT
GCAAAGATTA TCAAAGAACT TGTTCGTCCT TGGTGGGGGA GTGATCGGAT TGTGTGTGCT
GATTCTTATT TTGCCTCCGT TGTGACAGCT GTCGAGCTTA AGAGGATTGG CTTGAGATTC
ATTGGGGTTG TGAAGTCGGC AACGAGAAGA TATCCAATGG CCTACCTTTC ACAGTTGGAA
ATGACAAGTA GAGGAGAATG GAAAGGATTG GTGACAGACG GAATCTCGGA TGGAAGTTGT
GACCTGATGG CTTTTGTATG GGTGGACCGA GACCGTCGAT ATTTTATATC AACAGCATCC
AATCTGAATA GAGGCTGGAA TCCAGTTCGC TACCGGTGGA GACAGGTGGA TACATCACCT
GATGCAGACC CTGAGAGGGT GGAGATCAAT ATTGCGCAAC CAGTTGCAGC AGAAGTGTAT
TATTCTTGTT GTGCAATGAT TGACAGACAT AACCGGAGTC GGCAGGATAC ACTGATGCTT
GAAAGAAAAC TTGGCACATG GGATTGGTTG ACACGAGTCA ACTTATCAAT TTTTGGTATC
ATTGTTGTGG ACACATGGTT AGCCTACAGC CAATGTACAG GAATAGGAAA GTCTGCTGGA
CGAGAAGAAA AGCAGAAGGA TTTCTACAGT GCCTTAGCCG AGGAGCTGGT GGACAACCAG
TACGATAGTG TTGGAAGTCG CAAAGTTGGG GGGGATGAGT TGGACAAGGA TAGCCCAACC
ATCTCCAGAA CTGGAGAGCC GCGATGTGGT CTCTCCGCAC ATCTAACACC CACCAAAAGA
AAAAGAAAGA ACAAAGATGG TACTATTAAA AACCAAAGAC AGCAGGGAAG GTGTTTGGTG
TGTTCCAAGA AGACCACATA TGTTTGCTCT GTATGCAAAG ATGTTGAGAC AATTGAAAGC
AAAGAACCTT GGATTTGCTA CACAACGGGA GGGCAGCTAT GCTTTGCCCA GCACTTGACT
ACCTTGCATG GTAGTTAA
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| Protein sequence | MPVRDPRLRI GGKVTAKACH VVHLSECARR YGVNKHSKRL VGTVLDVTTT PVSITTGRTS
TLITAVYDFG ESLFKEKTLN IRSVKAFVPP EDEGMSLIEE LAAEALQAAE ADMEGGNLME
ESVEAPVAKM VETPADIEPD TLVDTEPNTP VDTEPNSPVA EIVETPVDTD TSVDTESENP
VATVHQTECL HSETRIQSQP ENFFGSLECS YSLQSLSSVA GPNYGPPLHP PSTFLPLHLD
AQECPGNGLT ISGNISIGVN NVQSDPMHRS KNFVPSHLIC VDESISRWYG QGGDWINHGL
PNYIAIDRKP ENGCEIQNAA CGQSGIMLRL KLVKGKTITD DEEGDEEDEY LPHGAKIIKE
LVRPWWGSDR IVCADSYFAS VVTAVELKRI GLRFIGVVKS ATRRYPMAYL SQLEMTSRGE
WKGLVTDGIS DGSCDLMAFV WVDRDRRYFI STASNLNRGW NPVRYRWRQV DTSPDADPER
VEINIAQPVA AEVYYSCCAM IDRHNRSRQD TLMLERKLGT WDWLTRVNLS IFGIIVVDTW
LAYSQCTGIG KSAGREEKQK DFYSALAEEL VDNQYDSVGS RKVGGDELDK DSPTISRTGE
PRCGLSAHLT PTKRKRKNKD GTIKNQRQQG RCLVCSKKTT YVCSVCKDVE TIESKEPWIC
YTTGGQLCFA QHLTTLHGS
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