Gene PHATRDRAFT_33720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_33720 
Symbol 
ID7197973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp209997 
End bp210779 
Gene Length783 bp 
Protein Length260 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178181 
Protein GI219114771 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTCAT CCTCTGGAAA CAACAATAAT AGCAGCAAAA CAAAAGAGGC AGCCATCATT 
TTTCTGCACG GCTTAGGCGA TAGCCCCGCC GGTTGGTCCT CCCTTGCACA AACTTTGCCG
CGCCTTCAAC CCCGTCTCGC GCGTGTGGAA TACGTCTTTC CACCCGCACC AACCATTCCC
ATTTCCATCA ACGGTGGCGC TTCCATGCCA GGCTGGTTCG ACTTGTACGA CTGGCCTATC
GCCGTTGGCG CGAAGCCTGA CACAACGGGG CAAGCGCGTG GGACGGCGCA AGTGGAAAGC
TGTATCCAAG ACGTGGAACG AATTCACGGT ATTCCGCGCA GCAAAATTGT TGTCGGTGGA
TTTTCCCAAG GCGGGGCCGT AGCGCTCTGG AACGCCTATC ACAATCATGA CCACGGCGTA
AATCCCAGAA ACTCAGAGTC AGTCAATAGC CGTCCCGCCC AACCACCCCT GGCCGGCTGT
GCTGTATTAT CGGGATGGTG GACTTTGGGC AACGATAGTA CAATTAAAAC AAGCGGCTCG
CCTTCGAAAA GCGTTGTCAA TGAGAGAACT CCATTGTTTT GGGCACATGG AGAATATGAC
GACAAGGTTC TATTCGAACA TCACACTCAC GGTGTGCAAA CGCTAAAAGA CGCCGGACTA
GTGTCCATAG AAGCGCCAAC TTACCCCATT GGACACGAGT CGGATCCAAA CGAAATAGAG
GCATTGGCCG AGTTTCTGGA TCGCGTCTTG TTTGGTGACA AAGCTGTATT CTCCGAGTTG
TAG
 
Protein sequence
MSSSSGNNNN SSKTKEAAII FLHGLGDSPA GWSSLAQTLP RLQPRLARVE YVFPPAPTIP 
ISINGGASMP GWFDLYDWPI AVGAKPDTTG QARGTAQVES CIQDVERIHG IPRSKIVVGG
FSQGGAVALW NAYHNHDHGV NPRNSESVNS RPAQPPLAGC AVLSGWWTLG NDSTIKTSGS
PSKSVVNERT PLFWAHGEYD DKVLFEHHTH GVQTLKDAGL VSIEAPTYPI GHESDPNEIE
ALAEFLDRVL FGDKAVFSEL