Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_33646 |
Symbol | |
ID | 7197908 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011672 |
Strand | - |
Start bp | 3038 |
End bp | 6966 |
Gene Length | 3929 bp |
Protein Length | 1297 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178412 |
Protein GI | 219115233 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTCGTC CGAGGAAGGT CACTCCAGCT GTTCCGGCCC CTGCCGCAGC GACGGACTCA CCGGCTGATG CCGCGTCCGC ATCCGAAGAG GATGAGGAGT TCGGAGGATT CGACTCCTCC GACGGTGAGG AGCCTTCGGG CACCGCACCG CCATCGCCAG CATCTTCGGA TGATGAAGGT GATGGCAAAA AGACTGCAAA GCCTTTGGCT CGCAGCAAGA ACACGTCTGA CGAAGTCAGC GTGATCGAGA AAAGCGTCAT CGACGCAGAG CCTCACTTGT CTAAAGACAG TGACGGTCTC GACTCCGTTC CTCGGCAAGA CCGTGTTGAA CGAAAGGCCT TGATGGTCGT CCTCCGTGAC GTCATCTGTG TTCCATTGTC AGTTGCGGCT GCAATGTTGA ACAACGGCAT TAAATCATCT GATGATTTCC GTCTTCTCAC GAAGGAGGAC ATCAATGATC TCTGCATGCG GCTCAAAATG GGCTCCATGC ATACCAAGCG AATACTCGTC TTCGCCAAAT GGATGCATCA CGCACCCAAC TCAGTCGATG TCGCCAAAGA GTTCACGGCT TCCGTGCTAC GCTTTGAGAT GATGACTAGA GCCGCGGCGT CGTATGATAA TGTGACTACG ACGGCTGCAA AGGCTGAAAA ATCGGCTACT AGCCTCTTGC CTGAACCGTT TGATGGTTCG CAGAAAAAGT GGCTCACTTT TCGTTACGGT TTCGAAGCGT GGGCAGGCGC AAGTGGGTCC ACTTTTACCG CGTGCATCGC GCACCATTCG GATCGGTATT CGAAAGCCGA CCCAACCGGA CCCCATACGT CGCCCCGTGA CGTTTCAGAT TTGTTTGCAC TCTCCCCAGT TGTCAACATC ACCAGGAACG CAACAATCTT CTATACTCTC ATGTCGCTAA CCAGCGCTGG GGACGCCTGG GGACTTGTTG AGCCCCACGA GCACACTAAG GACGGACGCA GTGCCTGGAT TTCTCTATGT GCCTTCTATG AAGGAACGAG CCAAGTGGGT CTCACTACCG AGCAGGCTCG CGCGACAGTT ATGGAGTCGG TGTATACAGG ACTGTCCAAA CAGTTTTCCT TCACCAAATA TGTCGCTCGG CATATTTCTG CCAACAATGC CCTTTTGCGT AACAAGGAGG GCTATTCGGA CGCTCAGAAA ACGAATTTCT TTCTTAAAGG GATTACTGAT CCGGCACTCC TTCCTTATAA GGCAACTGCC GAAGCACGAC TCGATGACTG GAATTTTAAT CGGGTCGTCA ACTACATGCG TACGTCCGCG ACGAAACTCA GTTCCAAGGA CAGAAGCGAC TCACGGAACG TACGTCAGAC AAAGACCACT GGCAGAGCCA CCGGCAACCA ACGTGGTAAC GACAACAAAC GGCGTGGCTC GTCCAACCGT CCGTCGAACA AGGGGGCTGA GAAACCTTCC CGCCCTCATA AACACGTCTT ACCTCCTGAG CTGTGGGAAG CCCTAACCCC AGCTATCAGG GAGAGTATCT TGAGCGCAAA ACGCAGTATT GCACCCCCTG GCCGTGAGGC CAAAAGGGCT AAATCCTCAG ATACAGATAA CTCTAGTTCA ACCGTTGAAT CTTATTCACA ACTGCCTAGT AGTAAAAAAC CTATTCGTAA ACATACATGC GAAGATCACG TCCAAGTAGA TTCCAGTACC CCTGAAACCC TACTTCGTGA CGCACCCACA GACATTTCAC CCCACGTCAC CACCAAAAAA GTGACATTTG GTGCAGGTGT CCTCTTTGGT CGGTACGCTA ATCGCGTATC GTTGAATCGT ATGGTCCGCT CCGGCAGTCA TTTCGATCAA GCCCCTTGGC GCAAGTCGGA TTTCCGACTT AACGATGCGA CACTAGTTCG TATTCGTCAG AACCGCTCAC GCGGAACAAA ACCTCCCACC AATTATGGTG AAGCGGTAAT TGATACTGGT GCAGACACCG TCTGCGTCGG TGCCGGGTAC TCTGTATTGT CATACACGGG TCGATCAGTC AGCCTTCGCG GTTTTCATGA TGACGGTGAA ACGTTTGAAC GGATTCCGGT TGTCACGGCG GCAACCGCCT ATGATTATGA CGACGGAACA ACCGTGATTC TCATCTTTCA TGAGGCACTG AACCTCGGGC CCACACAGAC CACCTCGCTC ATTAATTTGA ATCAAATCCG ACATGCCGGA CATCAAACCG ATGACATTCC AAAATTTTTG TCGCAAGGCA AATCCCTTCA CGGCATCGAA ACTCTCGACG GTGATTATAT CCCGTTTGAG CTCAAAGGTC GTGCATCCCT GTTGTATTCT CGCGTACCTA CTCAACATGA GCTTGACAAC TGTCAGCACA TTGATCTCAC TTGCGATCAA CCATGGGACC CCAACAGTAA AGATTGGGAA GAAAATGAAG CAAAGTACAC GCGACACGAT CGTTCTCGTC GTGCCTGCTA CACCGACAGC GTACCGGTTG ACATTCTCCC GGATTGGCCT CCACTACCCG TTTCCCCTGG ATCCGTTGTA CCGGATTTCC ATAACCATGT CATGAACCCT CGCGACGTCG TTCGCGAACT CAAATACGCC ACTATCGGTG CGTCCATATC CAGCCCTCGG GTGTTGGACG TCGACCGCGA TAAATTACGG CGAATTCTCG GACATGTGCC GATGGAAGTA GTTGAGCGTA CTCTTACCGC CACTACACAA CTAGCGGAGC GCACGGGCGA AATGCCTTTG CATCGTCGTT ATAAAACCAA GTTTGAACAA CTTCGGTATC GACGTTTGAA ATGCACACTT TATAGTGATA CTTTTAAATC CTCTATAAAA TCCTCGCGTG GACATACCCA TACTCAGGGT TTTGTCTGTG GTGACTCTTA CTTTATCTAT CATTACCTAA TGAAAGCAGA GTCCGCGGCA GACCAGGGTC TCGCCGAATT CATCCACAAC ATCGGTATTC CTGCACAATT GCACACCGAT AACGCGAAAG TGGAAACACT TAGCAAATGG AAAAAATTAA CTTCCAGTCA CTGGATAAAG ACGACGGTCA CTGAACCCTA CTCTCCGTGG CAAAATCGTT GCGAACACGA ATTTGGTGCT GCGCGCATTC ACACGCGCCT CGTTCTCGAA ACCACCAAGT GTCCCGAACA ATTATGGGAC TACGCCCTTG CCTACGTCAT TTTCGTACGT AACCACACGG CACGAAAAGC GCTGGCCTGG ATCACGCCTA TTACTGCGAT GACTGGCGAC ACCCATGATA TTTCTGAAAT CCTGGTTTTC GAATTTTTCG AACCAGTTCA GTATTTTGAC AATCCTGATG TCAAATTTCC ACAGAATAAA GCCAAAGTCG GCCGTTGGTT AGGTATTGCC ACCAATGTGG GCCAAGCCTT GTGCTACCAT ATTTTGACGG ACAAGGGTAC TGTAATCACT CGATCTACTG TTACACCTCT CCAAAACCTC GATTCGTCTG CTCTGCAGAC TGCCCTCGCT ACTTTTGACG CCACCATAAG GGAGATTTAT CAGCCTTCTG ATTTCGCCCT CGGTAACAAA ATCAAAGCGC CGGCTTTCCG CCGTGACGAA GCGATGAAAG TCGCTCGGCG ATCCGACGAT CCCGGCGATG GCAACACCCG TAACAGACAC GTGTTATACG ATCTGAACGA AGGGGATGAC CATATTCAAC TGGATCCCGG GCTCACGGTT GACGATTTCT TCGAGAACGA CTCACCGGAT CAGGACCCCA CCTCCTTAAT TATTGGTACT GACGTTCTAC TCACTTCGGG TGCGGTTCAG CGCCAGGGCC GAGTTACCAA GCGCGATCGC GACGGTACTC CAGTCCCTAA CGACGACCCT GGAAATTTCG TCGTCGAATT CGACGACGGT ACCGAGGAAG TCCACGGTTA CCAAGCTCTC CTTGATGCTG TTTATAAGCA GGTCGATGA
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Protein sequence | MRRPRKVTPA VPAPAAATDS PADAASASEE DEEFGGFDSS DGEEPSGTAP PSPASSDDEG DGKKTAKPLA RSKNTSDEVS VIEKSVIDAE PHLSKDSDGL DSVPRQDRVE RKALMVVLRD VICVPLSVAA AMLNNGIKSS DDFRLLTKED INDLCMRLKM GSMHTKRILV FAKWMHHAPN SVDVAKEFTA SVLRFEMMTR AAASYDNVTT TAAKAEKSAT SLLPEPFDGS QKKWLTFRYG FEAWAGASGS TFTACIAHHS DRYSKADPTG PHTSPRDVSD LFALSPVVNI TRNATIFYTL MSLTSAGDAW GLVEPHEHTK DGRSAWISLC AFYEGTSQVG LTTEQARATV MESVYTGLSK QFSFTKYVAR HISANNALLR NKEGYSDAQK TNFFLKGITD PALLPYKATA EARLDDWNFN RVVNYMRTSA TKLSSKDRSD SRNVRQTKTT GRATGNQRGN DNKRRGSSNR PSNKGAEKPS RPHKHVLPPE LWEALTPAIR ESILSAKRSI APPGREAKRA KSSDTDNSSS TVESYSQLPS SKKPIRKHTC EDHVQVDSST PETLLRDAPT DISPHVTTKK VTFGAGVLFG RYANRVSLNR MVRSGSHFDQ APWRKSDFRL NDATLVRIRQ NRSRGTKPPT NYGEAVIDTG ADTVCVGAGY SVLSYTGRSV SLRGFHDDGE TFERIPVVTA ATAYDYDDGT TVILIFHEAL NLGPTQTTSL INLNQIRHAG HQTDDIPKFL SQGKSLHGIE TLDGDYIPFE LKGRASLLYS RVPTQHELDN CQHIDLTCDQ PWDPNSKDWE ENEAKYTRHD RSRRACYTDS VPVDILPDWP PLPVSPGSVV PDFHNHVMNP RDVVRELKYA TIGASISSPR VLDVDRDKLR RILGHVPMEV VERTLTATTQ LAERTGEMPL HRRYKTKFEQ LRYRRLKCTL YSDTFKSSIK SSRGHTHTQG FVCGDSYFIY HYLMKAESAA DQGLAEFIHN IGIPAQLHTD NAKVETLSKW KKLTSSHWIK TTVTEPYSPW QNRCEHEFGA ARIHTRLVLE TTKCPEQLWD YALAYVIFVR NHTARKALAW ITPITAMTGD THDISEILVF EFFEPVQYFD NPDVKFPQNK AKVGRWLGIA TNVGQALCYH ILTDKGTVIT RSTVTPLQNL DSSALQTALA TFDATIREIY QPSDFALGNK IKAPAFRRDE AMKVARRSDD PGDGNTRNRH VLYDLNEGDD HIQLDPGLTV DDFFENDSPD QDPTSLIIGT DVLLTSGAVQ RQGRVTKRDR DGTPVPNDDP GNFVVEFDDG TEEVHGR
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