| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_26190 |
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| Symbol | |
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| ID | 7197790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011672 |
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| Strand | + |
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| Start bp | 848291 |
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| End bp | 850522 |
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| Gene Length | 2232 bp |
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| Protein Length | 742 aa |
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| Translation table | |
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| GC content | 55% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002178316 |
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| Protein GI | 219115041 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.228978 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGGATGT ATGCGCTGAT ACTGCTAGCC GTTACGATGC TTTTCTTCTT TGCATTACCA
ATAGAATGGG CTATTTTGTC TCTGGTCTTT GGGTCCTGCG GATTCGGCGC CATTGCCTCT
CTCTGGCTCA GTCGCGCCGT CCTGCAGTGC GACGACGGGA CGCCCGAAAT GCGCGCCGTT
TCGGATCCCA TCCGCGAAGG CGCGGAGGGC TTTCTTAGGG TCCAGTACAC GTCCATTGCC
AAGTTTGCCG TACCACTCGC CGCACTCATT GTATTCTCCT ACCAATTCCG ACCACTGCAC
CCGCACGACG CCAAGGGTGT CGGATTGTTG GGCAACACCC TGCTGGGGGT CGTCGCGGCC
GTCGGCTTTG TCTTTGGCGC ACTCTGCTCG GCACTCTCGG GATACGTATC CATGTGGGTG
GCGGCACAAT CCAATATTCG AGTCGCGTCG GCGGCTCGTC GGACCTACGG AGAAGCTCTC
GTGGTTTGCT TTCGCGGTGG CGCCTTTTCG GCCGTCTTGA ATTTGACCCT CTGTATAGTG
GGAGTCACTA CACTGTACAC GATGCTGAGC ACCGTCTTTG TGAACGCTGC GGGGTTGGAG
TCGACAGATA TACCCATGCT CTTGGTCGGG TACGGTTTCG GGGCATCCTT CGTCGCGCTC
TTTATGCAAC TCGGGGGTGG TATTTATACC AAAGCCGCCG ACGTTGGCGC CGACCTGGTG
GGGAAGATCG AACAGAGTAT TCCCGAAGAC GACCCTCGCA ATCCCGCAGT AATTGCGGAC
CTCGTCGGGG ATATGGTGGG TGACTGCGTC GGGTCTTCGG CCGACGTCTT TGAATCCGTG
GCGGCCGAAA TTATTGGAGC CATGATTCTG GGCTCCACCC TGGCCGATGA GGCCGGTATG
AGTCACAACC ATGCGACCAA GTTTATGTTC TTTCCACTAG TGGTACACGC CATGGATATT
GTTGTCAGTA GTGTTGGGAT TGCCTTTGTG GGGGTCACCC GCGACTCCGC CGATAGCGAT
CCCATGAAAG CTCTGCAACG AGGCTACCGT GTAGCACTCC TGCTCTCCGT CGTGGGCTTT
TACATTATTA CCCACTGGCT GCTGGCGCTT CCCGAAAATC CCGAGGCCGC GTTCAGATTC
TTCTTGTGCG GTATCGTGGG AATGATCTGC GCCTACATTG TGGTCTTGTC CACGCAGTAC
AATACCGATT ACGCACACCG ACCGGTCCAA AGTATTGCGG AAGCCAGTAC CACTGGTCAC
GGTACGAACA TCATTGTCGG AGTCAGTGTC GGTATGAAAG CCACGTTGGT ACCCACATTG
ACTGTAGCGG TGGCCGTATT GCTGGCCTAT CACGTAGGTG CCAGTACCGG AATTGGAAAC
GGCCGCAACG CCGGACTTTT TGGCACGGCG GTGGCTACCA TGGGAATGCT GAGTAACGCT
GTCTACATCC TGTCGATGAA CTGCTTTGGT CCCATTGCCG ACAACGCGGG AGGCATCGCG
GAAATGAGCA TGCAGCCGGA GCAAGTCCGA GATGTGACGG ATCGCTTGGA TGCCGCGGGC
AACGTGACCA AGGCCATTAC GAAGGGATAT TCGATTGGTT CGGCTTCTAT GGCGTGCTTT
CTGTTATTTG GCGCATTCAT GGACGAGTTT TCAGAGTACA GTGGTCTTCC GTTCACCACA
GTGGACATCG CGACACCGGA AGTACTCGTT GGAGGTCTGA TAGGAAGCAT GATCATCTTT
TACTTCACTG GTCTTGCGAT CGCTGCGGTC GGCCGGACCG CTCACGAAGT CGTTATTGAA
GTCCGGCGAC AATTCAAAGA GAATCCGGAT ATCATGGATT ATAAAGCCAA GCCAGACTAC
GATCGCTGTG TCGGGCTCGT GACAAAGGCC GCCTTGAAGG AGATGCAATT TCCTGGACTC
GTTTGCGTTG CGACACCAAT CCTTGTCGGA CTGATTTTTC GGTTCGTCGG TGAGGCTACC
AGTCGTCCTC TACTTGGAGC CGAAGTCTTG GCTGCGTATC TCATGTTCGG GACCGTGACA
GGAATTCTCA TGGCTTTATT TCTTGATACT GCCGGTGGTG CCTGGGACAA TGCGAAAAAG
TATATTGAGC TCGGAAACTT TGGCGGCAAG AATTCTGAGG CACACAAGGC GTCGGTGACT
GGTGATACCG TCGGCGACCC CTTTAAGGAT ACCGCCGGTC CCTCACTCCA CGTTGTAATC
AAACTGGTAA GT
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| Protein sequence | MYALILLAVT MLFFFALPIE WAILSLVFGS CGFGAIASLW LSRAVLQCDD GTPEMRAVSD
PIREGAEGFL RVQYTSIAKF AVPLAALIVF SYQFRPLHPH DAKGVGLLGN TLLGVVAAVG
FVFGALCSAL SGYVSMWVAA QSNIRVASAA RRTYGEALVV CFRGGAFSAV LNLTLCIVGV
TTLYTMLSTV FVNAAGLEST DIPMLLVGYG FGASFVALFM QLGGGIYTKA ADVGADLVGK
IEQSIPEDDP RNPAVIADLV GDMVGDCVGS SADVFESVAA EIIGAMILGS TLADEAGMSH
NHATKFMFFP LVVHAMDIVV SSVGIAFVGV TRDSADSDPM KALQRGYRVA LLLSVVGFYI
ITHWLLALPE NPEAAFRFFL CGIVGMICAY IVVLSTQYNT DYAHRPVQSI AEASTTGHGT
NIIVGVSVGM KATLVPTLTV AVAVLLAYHV GASTGIGNGR NAGLFGTAVA TMGMLSNAVY
ILSMNCFGPI ADNAGGIAEM SMQPEQVRDV TDRLDAAGNV TKAITKGYSI GSASMACFLL
FGAFMDEFSE YSGLPFTTVD IATPEVLVGG LIGSMIIFYF TGLAIAAVGR TAHEVVIEVR
RQFKENPDIM DYKAKPDYDR CVGLVTKAAL KEMQFPGLVC VATPILVGLI FRFVGEATSR
PLLGAEVLAA YLMFGTVTGI LMALFLDTAG GAWDNAKKYI ELGNFGGKNS EAHKASVTGD
TVGDPFKDTA GPSLHVVIKL VS
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