| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_26157 |
|---|
| Symbol | |
|---|
| ID | 7197768 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011672 |
|---|
| Strand | + |
|---|
| Start bp | 735627 |
|---|
| End bp | 736576 |
|---|
| Gene Length | 950 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002178292 |
|---|
| Protein GI | 219114993 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.340086 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CACACAGTTT GATCGCCCTT CTCCCTTGTT CTTCATACTG TCACGTAAGA TCCATGCCGA
GCGAAGACAC TCCCTTGGTA GCAGGCTCCG CTGCCCGCGA CGCGTTTCAA AGTGCCGACG
CGAAAAAATC CCGGCAGTAC CACGATGCGA AGAGCGCCAG CGAAGACGGC CATCAAACCG
AAGGAGGAAT GCTCAAACCC ATCATTTTTG GAGGTCTGGA TGGGATCCTC ACGTCGTTTG
CAATTGTTGC AGGGGCCGCT GGAGGAGAAC TATCCCCCCA GGTCGTCCTC ATTCTCGGCG
TCTCCAACAT TTTCGCGGAC GCTCTTTCGA TGGGTGTCGG AGAGTTCCTT TCATCTAAAG
CCAACAATGA GTGGATCTTA TCGGAACGAG CTCGTGAAGA ATGGGAGTTG GAAAATTATC
CTGAGGGCGA AATAAAAGAA ATGGTTGAAA TATTTGAAGA CAAGGGGATG TCCCACGAAG
ATGCAGTTTC CTGCATCAAT ACAATGGCAA AATACAAAGA CTTCTTTGTC GATATAATGA
TGCAGCAGGA GCTGGAGCTT CAAGTTCCGG ACAAAGATCA CATTAGAGAG AGCATGAAAG
AAGGAGTTGT CATGTTTTGT TCCTTCGCTT TCTTCGGAGC CTTGCCTCTC CTCGGTTATG
TTCTTTTCCC ACTCGAATTC CACGACATGT CGGAAGGTGA ACTTTTTGTC TCCGCATGTA
TAGTCACAGG AATGGTGCTC TTCTTCATGG GTTCGGTCAA GAGCTTTTTT AGTAATCAGC
AGTGGTTTAT TGCTGGGATG GAAACCCTGC TACTAGGAGG AGCATGTGCA ACAGTTGCCT
TTACAATTGG TCAGCTTGTC AAGAGCGTTT ATGGTGACGA CGCTGATCTG GTGTAGCGGC
TAAAGTCAAT CTACGACAAA TCTACTACTA GAAAGACATG TTTTATACCC
|
|---|
| Protein sequence | MPSEDTPLVA GSAARDAFQS ADAKKSRQYH DAKSASEDGH QTEGGMLKPI IFGGLDGILT
SFAIVAGAAG GELSPQVVLI LGVSNIFADA LSMGVGEFLS SKANNEWILS ERAREEWELE
NYPEGEIKEM VEIFEDKGMS HEDAVSCINT MAKYKDFFVD IMMQQELELQ VPDKDHIRES
MKEGVVMFCS FAFFGALPLL GYVLFPLEFH DMSEGELFVS ACIVTGMVLF FMGSVKSFFS
NQQWFIAGME TLLLGGACAT VAFTIGQLVK SVYGDDADLV
|
|---|
| |