| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_26077 |
|---|
| Symbol | |
|---|
| ID | 7197869 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011672 |
|---|
| Strand | + |
|---|
| Start bp | 457961 |
|---|
| End bp | 459652 |
|---|
| Gene Length | 1692 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002178228 |
|---|
| Protein GI | 219114865 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.076803 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TGGAAACCAG ATGATGGATA CCATATCGAA CGTCTCACAA TCAGTCTTGG AGCCCTTATG
GAGTCGTCGG GGTCTCTGAC AGTGAATTCG AAAGACTTTT GACTGTGAGA TCTATTCACC
AAGGCGAATC CGATTGATGT TGGCTCCGCT GTCGGTGACA CATTGGCCCC AATTTTTTGT
TTTCGTCATG TCTCTGCTGC TGCGACGGAG CGCTGCCGGT TTCACCGGTA CTTTTCGTCG
CCGACGGTGG TCTCGGACGA CGTTGACTTC GGACAGTGCA TCACGATTGT CATCGCTGCC
ACCACTATCG GCAGAGCCTC TGCACTGGAA CCGCGAAACA TCTGAACGTC GATCCTATGC
TACCAACACG CCGATCGTAA AGCAAGCCAA TGTTATTTCG CTGACGGATA TAGAAGATCC
CGCCAACAAT CCGTTCAACC GGGCCGCTCC CCTGCCGGAA GGAGTTAAAA TTCTTGCCAT
TGGCGCTACC ATGGACGATT TTGACGTTGC TTCTTTAGAG AGAGAAGGCG CCAATGCCAT
TTTTGTCAGT CACCCGCAGG CACGGGAACC CTTGGCCCAG CTGTTGACGC AACTGCCGGA
GATTGAATGG GTGCACACTC GCTCGGCGGG CATTGATTTC GTCACATCGC CTACACTCGA
ATCCTGGAAG GGCAAGCTCA CGAACGCCAA GGGTCAGTTC AGCAGTACGT TGGCAGAATA
TACACTCATG GCCTGCTCGT TTTTGTAAGT CGTACAGCAC TGATGTGTCG AGCTTGTAGG
GTAAAGTCAA CCACCAGTCT TCGACTCTTC TGAGCCTTAC CAGCTTCTGC TTTTCCTTAG
TGCCAAAGAC TTGCCGCGGT TGATGCGCAA CAAGAAAGTC AAGTGTTGGG ACAAATACAA
TGTCTTGGAG CTCAGAGGTG CGACCTTGGG TATATTTGGG TACGTATCTG CTGCACTTCT
GCTCGTCTTT TTCTTTGTAA AGGTCAATTT CTTACAGGCA GTTTTTGTTC AAGTTCAGCT
ACGGTGACAT TGGACGGTAC GTACATGAAA ATGCAGTCAT CTTACGAACG GATTTTCAGT
CCAAACTCAA AATGCATTTT ATTTCTTGTA GAGCTTGCGC GAAACTGGCG GCCGTGTACG
GTATGAAGAT CATTGCGTTA CGACGACACC CCAAGCCCGA TCCACTTTGT AATGAAGTGT
ACGGCAACGA CAAGGATAGT TTGAATCGCT TGTTTGCCGA ATCAGATTAC GTACTGTGCT
CAGCACCTTT AACGGCCGAA ACCCGCGGAA TGATTGGTAA AGAACAGTTC GATCATGCCA
AAGAAGGGGC CGTTTTTATA AATCTTGGAC GGGGGCCGAT TGTCGATGAA GTTGCCTTGA
CCGATGCACT GAGTAACGGT AAACTCAAAG GCGCCGCATT GGATGTATTC ACGGTAGAAC
CGCTGCCGAA TAGCTCGCCT TTGTGGGAAA TGGACAACGT GCTGCTCTCA CCGCACAACA
TGGACCAAAC CGCAACTTTC ATGCACGAAG CGACCGAGTT CTATGTGGAA GAAAATCTGC
CAAGGTTTGT CCGGGGTCAG GAATTGCTCA ATATCGTCGA CGCCAAGGCG GGATACTAGG
TATTGCTAGA ACAGCAACAT GAGGATGCTT TTAACCTATC TTACATTAAT GTAAACGAAA
AGAAACGGTT TT
|
|---|
| Protein sequence | MLAPLSVTHW PQFFVFVMSL LLRRSAAGFT GTFRRRRWSR TTLTSDSASR LSSLPPLSAE
PLHWNRETSE RRSYATNTPI VKQANVISLT DIEDPANNPF NRAAPLPEGV KILAIGATMD
DFDVASLERE GANAIFVSHP QAREPLAQLL TQLPEIEWVH TRSAGIDFVT SPTLESWKGK
LTNAKGQFSS TLAEYTLMAC SFFAKDLPRL MRNKKVKCWD KYNVLELRGA TLGIFGYGDI
GRACAKLAAV YGMKIIALRR HPKPDPLCNE VYGNDKDSLN RLFAESDYVL CSAPLTAETR
GMIGKEQFDH AKEGAVFINL GRGPIVDEVA LTDALSNGKL KGAALDVFTV EPLPNSSPLW
EMDNVLLSPH NMDQTATFMH EATEFYVEEN LPRFVRGQEL LNIVDAKAGY
|
|---|
| |