| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_19188 |
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| Symbol | HemE_2 |
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| ID | 7197643 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011672 |
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| Strand | - |
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| Start bp | 1162567 |
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| End bp | 1165840 |
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| Gene Length | 3274 bp |
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| Protein Length | 409 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | XP_002178653 |
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| Protein GI | 219115715 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AAACATTGCC TACTCTCGTG CTTGTACAAA TCTTACTTTG TACGTATCCA TCGATCACTC
AAGCAATCGT TTTACAGTTC TTTGTACAAT TCTGTTGCTT GCAATTATGA AAGTGTCCCA
CGTCGCTTTC AGCCTGTTCC TGGCTGGTTC CCAAACGACT GCCTTTACTA ATCCGGTATC
CAACTCGGCG AAACAACAAT CGTTCCGTCT TCCAAGTTCG GCATCGTCGG CAGCGGATAC
GACCTCCTCG GCCAATGTCG CTCAAAAGAG CACGCAAGAT CCGTTGCTTA TTCGGGCGGC
TCGTGGTGAA AAAACAGAAC GCACTCCTGT TTGGATGATG CGACAAGCTG GTCGCCACAT
TGCGGAATAC CGGGACTTGT GCAAAAAGTA CCCCACCTTT CGCGAACGTT CCGAAATTCC
GGAAGTCGCC GTTGAAGTCT CGCTGCAGCC TTGGCGCAAT TACCAGACTG ATGGATGCAT
TCTCTTTTCC GATATTTTGA CTCCTTTGCC AGGTATTGGA TGTGAATTTA CCATTGATGA
AAAAGTTGGT CCTCTTATGG AACCGATGCG CTCCTACGAT GACATCAAAA AGGTACGGAA
TGACTAGCGA CACGAATGGC TTCTTGCTTA ATAGTGTTAA TATAGTCTTA CATTTTCTAT
TCGTGTTTTG TGTAGATGCA CCCCATGGAC CCATACAAGT CCACGCCATT TGTCGCCGAA
GCTCTCAAGG CTTTGCGCCA AGAAGTTGGT CCGGAAACTG CTGTATTAGG CTTTGTTGGA
TGCCCTTATA CACTGGCAAC ATACATTGTG GAAGGCAAAA CATCCAAGGA ATACCTGGAA
ATTAAGAAAA TGGCCTTGAA CGAACCTGAT CTTCTTCACG CTATTCTGCA ACAATTGGCG
GACAACATTG GAGACTACGC CCTTTTCCAG ATTGAGAACG GCGCCCAGCT GATTCAGATT
TTTGATTCTT GGGCCGGACA TCTATCACCC CGGGACTACA ATACTTTTGC AGCTCCTTAC
CAAAAGCAAA TTCTTGACAA AATTAAGGAA AAGTACCCTG ACGTCCCGAC GGTCATTTAC
ATCAAGCACT CAGGTGCATT GATTGAACGC ATGGCGGCGA CGGGCGTAGA TGTCGTTTCG
TTAGACTGGA CTGTCGATAT GGCGGACGGG CGTGATCGCA TCGAGGCCGG ACGCAAGTCC
GCTGGTCTTG AAGGACGTGG GGGTGTACAA GGAAACTTGG ATCCAGCCGT TTTATTCGCC
AATCACGATG TTATTGAAGA ACGAGCGATT GAAATTCTCA AAAAAGCAGG CAGCGTTGGG
CATGTCATGA ACTTGGGGCA TGGTATTGAA GCCGCTACAC CAGAAGAAAA CGCACACCAT
TTTATTGAAA CTGTCAGAGG CTATCGTCAT GAGGAGTAGA CATTCATTAA ATATAGATTG
GTTGATCATT ATTGTATAAC TTCAAAATAG TACAGCGATA AACACACTCT TTGGCTTCTG
AAGGTTGTCT TAAACCATAA GTCTTACTTC GTTGTCTGTT CCACGAACTC CGGCTCCGTC
TTCTCTGTGA AAGTCGGCGA TCCAAACCGA GCCTAGGGAT TCTAGTGCTG CAGCATAGCT
TGACACGTCT TTTTCACGTT TGAATGGAAG AGCGAGCCCT CCTTGCCAAG TGCTGAACCG
ATATGCCGAA ACTGTATGTT TCGAAGGATG AATTCGGATC GAATGACCTA CGTGACAAGC
ATGGCTGCTG CTCGAATGAA ATTTGGAATG ACCGCACTCT AATCGAAATA CCTTGAGATT
CGACAGTGAA TTCACGCTCT TTCGAAAGTC GTCCAATCCG ACTTTGGGAC TTGCTGAGAC
TAAGCTGCCT ATACGCAATT CCGGCCGTGC GGATGCATAC CGGTAAGAGG CCAATGTAGC
CAAACCAGCG GCGTACCCGT GTCCTGAAAA GACCACGTCA TAAAAAGGGT TCTCTTCAAC
AAGTTGATCT ATCAAGGTAA ACAGCTTTCC TTCAATTTCG CATAGCGCCT TGTACCGATC
AATGAAGACA CTAACGTGTA TTCCAGTATC CTTCAGAATG GTTACATTGG TGTCTTTGGG
AGCTTTTCCT AGTTGTTCGG TATTCGTACC GCGAAACACG CAAAGAAATT GCCGTTGCCT
CTCAACAATC AAAACTTCTC GGCGGCTGCT TGGATCGCTG TTAGACACGT CCGAGGTGAG
AAAGCCACAG ATTTGCTGAA TGTCACTGCC GCACTCCAAA AGTGACTCCA CGATTGGTCG
GTGACAATCA GCTATCTTTC CTGTAAGACT ACCATAGCTA CCACGAGCAA ACGAAGCAAG
CTCCATCCGA CTTGCTCCTG TTAAGTCATT TAGATTCAGC AAACATTCCT CTTTTTGATA
TGTCTCAAGA TATTGAGAGA GTCTGATGCA AACCTGGAAC TCAGTCTTGG CTGGTATGCT
AACTTGCCAT TCAGCTGCTT CGTATTCAGG GGTACGAATG GTTTCCATAC CGGTCAAGAA
CGATGTTGGA CGCGGCTTGG CAAGTGATGG TATGGCAAGG GAATCCTTCA CTTTCGCTGT
CTTGTCGAAT TCTTTCTGCA CGTCCCACAA TTCTTGAAGC AATGGAGACG TGGGGTTCGC
TTTGATGCTA GCACCGGTAG ATCTGCCTCT AGTCGCTGTG GCTGGCTGTT TGTTTTGTGT
TCGTAGACCC TTTGATGTAC TAGTCGCAGT TGCAAAATAA TCGGTCTTGC GATTTGTTTT
TCTTTGCCAT GGAAGAAATG TTCCTTTTTC CTTTTTCACG GGGCTTGTGT TTTTAGGAAT
CACTTTCTGA TTATCATGTC GGATGGTGGT CAGAGTCTGA GGCTCTAACT GAGAACTTGA
GTTGCTAGAC GATAGTTTGC TTAGTTCCAT TGCTAAGACG CGGAGTTCCG AGGCCATATC
CGGGGGAGTG AATGGACGAT TATCCGGTGA TCCTTCCCCA TCTCGAGACT CTTCTGGCTG
ACAAGGTGGT GTGACGCTTC CTGAGAGGTG CGTCGACCGA GCGGCTACGG GATGCTTTGT
TTTCGTGGAG AAAAAGGGGT CAAACCCAGC TAAAGCGTTA TTCTGATATT TGGTGCTTCC
TATCGGGACG GTGTTGTGTC CAGCTAGGTG ACTGCTGTTT GAAATAGGCA TGGTGGTCGG
CTGTCTTCAA CTGTCCTTTG TTCAAAAAAT TAGTGATGCG ATAAGAGCAA CACTGGTTGG
TACCTGGGAT CAAATCGGGC GTGATTAATA AAGG
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| Protein sequence | MKVSHVAFSL FLAGSQTTAF TNPVSNSAKQ QSFRLPSSAS SAADTTSSAN VAQKSTQDPL
LIRAARGEKT ERTPVWMMRQ AGRHIAEYRD LCKKYPTFRE RSEIPEVAVE VSLQPWRNYQ
TDGCILFSDI LTPLPGIGCE FTIDEKVGPL MEPMRSYDDI KKMHPMDPYK STPFVAEALK
ALRQEVGPET AVLGFVGCPY TLATYIVEGK TSKEYLEIKK MALNEPDLLH AILQQLADNI
GDYALFQIEN GAQLIQIFDS WAGHLSPRDY NTFAAPYQKQ ILDKIKEKYP DVPTVIYIKH
SGALIERMAA TGVDVVSLDW TVDMADGRDR IEAGRKSAGL EGRGGVQGNL DPAVLFANHD
VIEERAIEIL KKAGSVGHVM NLGHGIEAAT PEENAHHFIE TVRGYRHEE
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