Gene PHATRDRAFT_19025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_19025 
Symbol 
ID7197767 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp732739 
End bp733712 
Gene Length974 bp 
Protein Length205 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178291 
Protein GI219114991 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TGTTGCCCTC GCGAACCGGC CCGCCACTCG TTACTGAAGT ATACTGGATC ACCATGAAGA 
CAGTTCTTGC ATCCCGTAAT ATCGTAATTC CCGACGGAGG TAAGCTTATT GGCTGTCGTT
ATGAAAGGAC TTTCCGATGG CGAGAATCGA TGGCAAATTG TCTAACGCTT CTATGTTGTA
CTATGTGCGG TAGTGACGGT GGAAATTAAT GCCCGAAAGA TTAAGGTGAC TGGACCCCGT
GGTGTACTGG AACGTGATTT CAAGCACATT TCTATGGATC TCCGTAAGGT CGACGGAGAA
TCTTTGGGAT ACACAGTGGA AGAGGATGGC GAAGAAGCTA CCAACGCCAG TTACATCAAG
GTTGACTTGT GGTTTGCCAC CCGAAAGCAG TTGGCTTGCG TCCGAACGGT GTGCAGTCAC
ATCGACAACT TGTTTGTTGG TGTCACTCGT GGATTTCTTT ACAAGATGCG ATTTGTGTAT
AGCCATTTCC CCATCAACGT TACGCTTACT GGCGAGACGG TTGAAATCCG CAACTTTTTG
GGAGAAAAGC GAGTTCGTAA AGTCAAACTG TTGGAGGGTG TTTCATACGA GCGTACTGCC
AGTGTAAAGG ATCAAATTGA ATTGAGCGGA AACGATATTG CTGCCGTTTC TCTCACAGCA
GCGAAGATCC AACAAGCTAC CAACATCCGT CATAAGGATT TGCGTAAATT CTTGGACGGA
ATCTACGTAT CGGAAAAGGG GCCCACCCCC GTTGCGGAAG ACTAAACATA AAGCTGTATT
TATCTTTCGA TCCTGAGTAT TGCTTGACAG GCTTCATAAA ATTCAGATCC TTGCTAGCTA
TGTGTGTATG GAAGGAATCA CAACGCTCTA TTATACCATG GACTTGAACC ACGCAGCGCT
GTTCCTCGTC GCAATTACGG TGAATGGGTT TGTTCATTCA TAGCTTGATA GACGACAAGA
GGCGTCTTGT GCAT
 
Protein sequence
MKTVLASRNI VIPDGVTVEI NARKIKVTGP RGVLERDFKH ISMDLRKVDG ESLGYTVEED 
GEEATNASYI KVDLWFATRK QLACVRTVCS HIDNLFVGVT RGFLYKMRFV YSHFPINVTL
TGETVEIRNF LGEKRVRKVK LLEGVSYERT ASVKDQIELS GNDIAAVSLT AAKIQQATNI
RHKDLRKFLD GIYVSEKGPT PVAED