Gene PHATRDRAFT_18872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_18872 
SymbolchlM 
ID7197982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp249972 
End bp250810 
Gene Length839 bp 
Protein Length258 aa 
Translation table 
GC content52% 
IMG OID 
Productmagnesium-protoporphyrin IX methyltransferase 
Protein accessionXP_002178460 
Protein GI219115329 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.333886 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GAGTATTCGC TGCTTGCTCG ATATAACGAA AGAAAGCATG AAACAAGCCG GCGCAGTCTT 
TCTCGCCTTG CTGTCTAGCG CCAGCGCGTT CGTCCCCTCA GTCCATTCGG TGTCATCGGC
TGGAAGTGCC CTTTTCTCCT CGGCGGACGA TAAGACCGAG GTCCGCGAAT ACTTCAACAC
GGAAGGCTTC AGTCGGTGGA ACAAAATTTA TTCCGACACA GACGATGTGA ACTCTGTACA
GATGGACATT CGCAACGGCC ACGACCAGAC CATTCAAAAG ATCCTCAAGT GGATTGCGGC
GGACGGCGAT ATTGACGGCA AATCGGTCTG CGACTGTGGC TGCGGCGTCG GCAGCTTGGC
TATTCCTCTG GCACAAATGG GCGCCAAGGT GTCGGCTTCG GATATTTCCG ACGCCATGTC
AACTGAAGCT GCTCGCCGGG CCGGGGAACT TGGTGTCAAG GCCGACTTTT ACACGTCCGA
TTTGGAATCG GTCTCCGGCA AATACCACAC CGTGACCTGC GTTGACGTGG CCATTCATTA
CCCCGACGAT AAATTCAAAG AGATGGTCAC TCATCTCTGT AGCTTGGCGG AAGACCGTGT
ATTGATCAGT TTTGCGCCCA AGACGTGGTA CTACGTTTTT TTGAAAAAGA TTGGAGAGCT
TTTCCCGGGA CCCTCCAAAA CAACCAGAGC CTACTTGCAT GAAGAATCCA TTGTCCGTGA
AGCGCTCCAA CAGGCTGGCT TTGAGGTTGC GCGGGATGAA ATGACGGCTA CTAATTTTTA
CTTCTCGCGA CTTTTGGAAG CCAAACGTGT GTAATCAAGC AAGCTATACG AGACACTTT
 
Protein sequence
MKQAGAVFLA LLSSASAFVP SVHSVSSAGS ALFSSADDKT EVREYFNTEG FSRWNKIYSD 
TDDVNSVQMD IRNGHDQTIQ KILKWIAADG DIDGKSVCDC GCGVGSLAIP LAQMGAKVSA
SDISDAMSTE AARRAGELGV KADFYTSDLE SVSGKYHTVT CVDVAIHYPD DKFKEMVTHL
CSLAEDRVLI SFAPKTWYYV FLKKIGELFP GPSKTTRAYL HEESIVREAL QQAGFEVARD
EMTATNFYFS RLLEAKRV