Gene PHATRDRAFT_11048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_11048 
Symbol 
ID7198000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp112915 
End bp113322 
Gene Length408 bp 
Protein Length136 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178432 
Protein GI219115273 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTTACCCTCC CACTTCCGTT CTCGGCCGAA ATTGCGTGTT CCCGGTTTAC AGATTTACCC 
CAACAGCCAC GCTGGTCGCC TTGGATTACA AGTGTTGAAT ATCAGGGCAC AGAATCCCAA
TGGAAAGTGA ATGTTCGAGG AATTTCTCTC ACCTGGAAAG CTATAAGTCA AGTTGTGGAG
GATCCCTGGC CAGGGATTTC GTGGGAGTCT GTTTCGGGTT TGACTAATAG AGGAATTGTT
GAATTTGTTC CGGATTCTGA AACCTCCTGC CTCATGAATG TCAGAATGGC AATTGTCCCC
CCTCGTATTT TACAGCCTCT CTTCCGCGGA ACCTCCGTCT TTATCGAAGA CTTTTTGCGC
GACAAGTTGT TGAAATGGTC TCTCGAGATG TTTAGGGATG TTGTTAAG
 
Protein sequence
VTLPLPFSAE IACSRFTDLP QQPRWSPWIT SVEYQGTESQ WKVNVRGISL TWKAISQVVE 
DPWPGISWES VSGLTNRGIV EFVPDSETSC LMNVRMAIVP PRILQPLFRG TSVFIEDFLR
DKLLKWSLEM FRDVVK