Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_10976 |
Symbol | |
ID | 7197740 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011672 |
Strand | + |
Start bp | 589265 |
End bp | 590525 |
Gene Length | 1261 bp |
Protein Length | 370 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | mannosyltransferase |
Protein accession | XP_002178258 |
Protein GI | 219114925 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.676469 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTATTGATCA TGGAACTTGG TCTCAATGTT GTGGTCATAC GAAAAGTAGC TTACACCGAA ATTGATTGGG AAGCTTACAT GCAAGAAGTC GAATTCTGGT TGGACGGGGA ATTGGACTAC CGCAAAATCT ATGGAGGAAC TGGGCCATTG GTATACCCTG CAGGCTTTCT CTACCTTTTT GCGTGGCTGC GGAAATTGAC AAATTCGGGC AACGATATTC AGACAGCGCA GTACATTTTT GCTGCATTTT ATGTAGGCAC GCAATTTGCC GTGCTATTAT TGTATCAGCA AATTCTCAGC TCTTGGCGTC GGCGCAAGGT CAACGAAGAG AATCCTACCG AATCGCCGGT CTCGGTTGCT CATCACGTCT GGTCGTGGCG AGTTGGTATG GCCGTGTTGT GTTTGTCCAA ACGAATTCAT TCCATTTTTG TTTTGCGTCT TTTTAACGAC GGGCCTACTA TGCTGCTTCT TTACATATCA ATGCTACTCT TTACGTGGAA TCGTTGGAAC GTGGGCTGTG TCGTCTTCTC CATGGCGGTA TCAATCAAGA TGAACGTTTT ATTATTCGCA CCTGGTTTGT TATTGCTCCT CCTCCAGGTG GGCCCCGATG CACAAACAGT TGCTCTACGG CTTGGATTAG GATGTGCTCT ACCACAGCTG ATACTGGGGG CACCATTTTT GACGACGTAC CCGGTTTCGT ACCTGAGAAA AGCGTTCGAA CTGGATCGCG TTTTCTTCTA TAAATGGACT GTCAATTTCA AGTTCTTACC GGAGGAAGTT TTCTTGTCGA AGGGATGGGC CAAGATTCTT GTGGCGCTTC ATGTCGGAAC GTTGGCGTTC TGCGCTACCC AACAACTAGC CCAAGCCAAA CGTAAAACAT CGAAGCAGAT CTTCCTGTTG GACCAAAGTT CTTCGAACCA GAATGCCCGT CGAATTTCTC CCGAGTATGT TGTGTACATC ATGTTTCTCT CAAATTTTAT CGGTATAGCC TTTGCGAGAA CTCTGCACTA TCAGTTTTAT GTAAGTATTT CGAGGTGAAT TTGAAAGCTG TTCCGATACC CCTCCAACTT ACTTAATATT TCTTTTCGCA AGATAGTGCT GGTACTTTCA CGGCTTGCCG TACCTCCTTT GGTCAATACC GAGTTATCCT TTGCTTTTAA AGATTGTGAT AATGGGGTGC ATTGAGGCAG CGTTTTTGTC ATTTCCGGCG ACTTCTTGGA GCTCCGCCAT ATTGCAGATC GCTCACCTTG CGATTTTGCT G
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Protein sequence | LLIMELGLNV VVIRKVAYTE IDWEAYMQEV EFWLDGELDY RKIYGGTGPL VYPAGFLYLF AWLRKLTNSG NDIQTAQYIF AAFYVGTQFA VLLLYQQILS SWLGMAVLCL SKRIHSIFVL RLFNDGPTML LLYISMLLFT WNRWNVGCVV FSMAVSIKMN VLLFAPGLLL LLLQVGPDAQ TVALRLGLGC ALPQLILGAP FLTTYPVSYL RKAFELDRVF FYKWTVNFKF LPEEVFLSKG WAKILVALHV GTLAFCATQQ LAQAKRKTSK QIFLLDQSSS NQNARRISPE YVVYIMFLSN FIGIAFARTL HYQFYCWYFH GLPYLLWSIP SYPLLLKIVI MGCIEAAFLS FPATSWSSAI LQIAHLAILL
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