Gene PHATRDRAFT_10976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_10976 
Symbol 
ID7197740 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp589265 
End bp590525 
Gene Length1261 bp 
Protein Length370 aa 
Translation table 
GC content46% 
IMG OID 
Productmannosyltransferase 
Protein accessionXP_002178258 
Protein GI219114925 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.676469 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTATTGATCA TGGAACTTGG TCTCAATGTT GTGGTCATAC GAAAAGTAGC TTACACCGAA 
ATTGATTGGG AAGCTTACAT GCAAGAAGTC GAATTCTGGT TGGACGGGGA ATTGGACTAC
CGCAAAATCT ATGGAGGAAC TGGGCCATTG GTATACCCTG CAGGCTTTCT CTACCTTTTT
GCGTGGCTGC GGAAATTGAC AAATTCGGGC AACGATATTC AGACAGCGCA GTACATTTTT
GCTGCATTTT ATGTAGGCAC GCAATTTGCC GTGCTATTAT TGTATCAGCA AATTCTCAGC
TCTTGGCGTC GGCGCAAGGT CAACGAAGAG AATCCTACCG AATCGCCGGT CTCGGTTGCT
CATCACGTCT GGTCGTGGCG AGTTGGTATG GCCGTGTTGT GTTTGTCCAA ACGAATTCAT
TCCATTTTTG TTTTGCGTCT TTTTAACGAC GGGCCTACTA TGCTGCTTCT TTACATATCA
ATGCTACTCT TTACGTGGAA TCGTTGGAAC GTGGGCTGTG TCGTCTTCTC CATGGCGGTA
TCAATCAAGA TGAACGTTTT ATTATTCGCA CCTGGTTTGT TATTGCTCCT CCTCCAGGTG
GGCCCCGATG CACAAACAGT TGCTCTACGG CTTGGATTAG GATGTGCTCT ACCACAGCTG
ATACTGGGGG CACCATTTTT GACGACGTAC CCGGTTTCGT ACCTGAGAAA AGCGTTCGAA
CTGGATCGCG TTTTCTTCTA TAAATGGACT GTCAATTTCA AGTTCTTACC GGAGGAAGTT
TTCTTGTCGA AGGGATGGGC CAAGATTCTT GTGGCGCTTC ATGTCGGAAC GTTGGCGTTC
TGCGCTACCC AACAACTAGC CCAAGCCAAA CGTAAAACAT CGAAGCAGAT CTTCCTGTTG
GACCAAAGTT CTTCGAACCA GAATGCCCGT CGAATTTCTC CCGAGTATGT TGTGTACATC
ATGTTTCTCT CAAATTTTAT CGGTATAGCC TTTGCGAGAA CTCTGCACTA TCAGTTTTAT
GTAAGTATTT CGAGGTGAAT TTGAAAGCTG TTCCGATACC CCTCCAACTT ACTTAATATT
TCTTTTCGCA AGATAGTGCT GGTACTTTCA CGGCTTGCCG TACCTCCTTT GGTCAATACC
GAGTTATCCT TTGCTTTTAA AGATTGTGAT AATGGGGTGC ATTGAGGCAG CGTTTTTGTC
ATTTCCGGCG ACTTCTTGGA GCTCCGCCAT ATTGCAGATC GCTCACCTTG CGATTTTGCT
G
 
Protein sequence
LLIMELGLNV VVIRKVAYTE IDWEAYMQEV EFWLDGELDY RKIYGGTGPL VYPAGFLYLF 
AWLRKLTNSG NDIQTAQYIF AAFYVGTQFA VLLLYQQILS SWLGMAVLCL SKRIHSIFVL
RLFNDGPTML LLYISMLLFT WNRWNVGCVV FSMAVSIKMN VLLFAPGLLL LLLQVGPDAQ
TVALRLGLGC ALPQLILGAP FLTTYPVSYL RKAFELDRVF FYKWTVNFKF LPEEVFLSKG
WAKILVALHV GTLAFCATQQ LAQAKRKTSK QIFLLDQSSS NQNARRISPE YVVYIMFLSN
FIGIAFARTL HYQFYCWYFH GLPYLLWSIP SYPLLLKIVI MGCIEAAFLS FPATSWSSAI
LQIAHLAILL